From 3f5d57d302188525f266ec041ebb745f6931876e Mon Sep 17 00:00:00 2001 From: Peter Carbonetto Date: Tue, 30 May 2017 22:36:50 -0500 Subject: Removing FORCE_FLOAT from some C++ source files. --- src/lapack.h | 48 ++++++++++++++++++++++++++++++++---------------- 1 file changed, 32 insertions(+), 16 deletions(-) (limited to 'src/lapack.h') diff --git a/src/lapack.h b/src/lapack.h index e5a1d37..5277b2f 100644 --- a/src/lapack.h +++ b/src/lapack.h @@ -1,6 +1,6 @@ /* - Genome-wide Efficient Mixed Model Association (GEMMA) - Copyright (C) 2011 Xiang Zhou + Genome-wide Efficient Mixed Model Association (GEMMA) + Copyright (C) 2011-2017 Xiang Zhou This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by @@ -13,7 +13,7 @@ GNU General Public License for more details. You should have received a copy of the GNU General Public License - along with this program. If not, see . + along with this program. If not, see . */ #ifndef __LAPACK_H__ @@ -23,31 +23,47 @@ using namespace std; - void lapack_float_cholesky_decomp (gsl_matrix_float *A); void lapack_cholesky_decomp (gsl_matrix *A); -void lapack_float_cholesky_solve (gsl_matrix_float *A, const gsl_vector_float *b, gsl_vector_float *x); +void lapack_float_cholesky_solve (gsl_matrix_float *A, + const gsl_vector_float *b, + gsl_vector_float *x); void lapack_cholesky_solve (gsl_matrix *A, const gsl_vector *b, gsl_vector *x); -void lapack_sgemm (char *TransA, char *TransB, float alpha, const gsl_matrix_float *A, const gsl_matrix_float *B, float beta, gsl_matrix_float *C); -void lapack_dgemm (char *TransA, char *TransB, double alpha, const gsl_matrix *A, const gsl_matrix *B, double beta, gsl_matrix *C); -void lapack_float_eigen_symmv (gsl_matrix_float *A, gsl_vector_float *eval, gsl_matrix_float *evec, const size_t flag_largematrix); -void lapack_eigen_symmv (gsl_matrix *A, gsl_vector *eval, gsl_matrix *evec, const size_t flag_largematrix); +void lapack_sgemm (char *TransA, char *TransB, float alpha, + const gsl_matrix_float *A, const gsl_matrix_float *B, + float beta, gsl_matrix_float *C); +void lapack_dgemm (char *TransA, char *TransB, double alpha, + const gsl_matrix *A, const gsl_matrix *B, + double beta, gsl_matrix *C); +void lapack_float_eigen_symmv (gsl_matrix_float *A, gsl_vector_float *eval, + gsl_matrix_float *evec, + const size_t flag_largematrix); +void lapack_eigen_symmv (gsl_matrix *A, gsl_vector *eval, gsl_matrix *evec, + const size_t flag_largematrix); -double EigenDecomp (gsl_matrix *G, gsl_matrix *U, gsl_vector *eval, const size_t flag_largematrix); -double EigenDecomp (gsl_matrix_float *G, gsl_matrix_float *U, gsl_vector_float *eval, const size_t flag_largematrix); +double EigenDecomp (gsl_matrix *G, gsl_matrix *U, gsl_vector *eval, + const size_t flag_largematrix); +double EigenDecomp (gsl_matrix_float *G, gsl_matrix_float *U, + gsl_vector_float *eval, const size_t flag_largematrix); double CholeskySolve(gsl_matrix *Omega, gsl_vector *Xty, gsl_vector *OiXty); -double CholeskySolve(gsl_matrix_float *Omega, gsl_vector_float *Xty, gsl_vector_float *OiXty); +double CholeskySolve(gsl_matrix_float *Omega, gsl_vector_float *Xty, + gsl_vector_float *OiXty); void LUDecomp (gsl_matrix *LU, gsl_permutation *p, int *signum); void LUDecomp (gsl_matrix_float *LU, gsl_permutation *p, int *signum); -void LUInvert (const gsl_matrix *LU, const gsl_permutation *p, gsl_matrix *inverse); -void LUInvert (const gsl_matrix_float *LU, const gsl_permutation *p, gsl_matrix_float *inverse); +void LUInvert (const gsl_matrix *LU, const gsl_permutation *p, + gsl_matrix *inverse); +void LUInvert (const gsl_matrix_float *LU, const gsl_permutation *p, + gsl_matrix_float *inverse); double LULndet (gsl_matrix *LU); double LULndet (gsl_matrix_float *LU); -void LUSolve (const gsl_matrix *LU, const gsl_permutation *p, const gsl_vector *b, gsl_vector *x); -void LUSolve (const gsl_matrix_float *LU, const gsl_permutation *p, const gsl_vector_float *b, gsl_vector_float *x); +void LUSolve (const gsl_matrix *LU, const gsl_permutation *p, + const gsl_vector *b, gsl_vector *x); +void LUSolve (const gsl_matrix_float *LU, const gsl_permutation *p, + const gsl_vector_float *b, gsl_vector_float *x); bool lapack_ddot(vector &x, vector &y, double &v); bool lapack_sdot(vector &x, vector &y, double &v); + #endif -- cgit v1.2.3