From 40a9d521f4ecc9d4762a5f8c1953ec5f321755f0 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Thu, 1 Oct 2020 09:57:34 +0100 Subject: These variables are introduced in DEBUG mode --- src/gemma_io.cpp | 2 ++ 1 file changed, 2 insertions(+) (limited to 'src/gemma_io.cpp') diff --git a/src/gemma_io.cpp b/src/gemma_io.cpp index 569c79b..81182f8 100644 --- a/src/gemma_io.cpp +++ b/src/gemma_io.cpp @@ -1557,6 +1557,7 @@ bool BimbamKin(const string file_geno, const set ksnps, // FIXME: the following is not so slow but appears to generate an // identical matrix + /* for (size_t i = 0; i < ni_total; ++i) { for (size_t j = 0; j < i; ++j) { double d = gsl_matrix_get(matrix_kin, j, i); @@ -1564,6 +1565,7 @@ bool BimbamKin(const string file_geno, const set ksnps, } } write(matrix_kin,"K rotated"); + */ // GSL is faster - and there are even faster methods // enforce_gsl(gsl_matrix_transpose(matrix_kin)); -- cgit v1.2.3