From 7762722f264adc402ea3b0f21923b18f072253ba Mon Sep 17 00:00:00 2001 From: xiangzhou Date: Mon, 22 Sep 2014 11:06:02 -0400 Subject: version 0.95alpha --- src/gemma.h | 52 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 52 insertions(+) create mode 100644 src/gemma.h (limited to 'src/gemma.h') diff --git a/src/gemma.h b/src/gemma.h new file mode 100644 index 0000000..acb1309 --- /dev/null +++ b/src/gemma.h @@ -0,0 +1,52 @@ +/* + Genome-wide Efficient Mixed Model Association (GEMMA) + Copyright (C) 2011 Xiang Zhou + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . +*/ + +#ifndef __GEMMA_H__ +#define __GEMMA_H__ + +#ifdef FORCE_FLOAT +#include "param_float.h" +#else +#include "param.h" +#endif + +using namespace std; + +class GEMMA { + +public: + //parameters + string version; + string date; + string year; + + //constructor + GEMMA(void); + + //functions + void PrintHeader (void); + void PrintHelp (size_t option); + void PrintLicense (void); + void Assign (int argc, char **argv, PARAM &cPar); + void BatchRun (PARAM &cPar); + void WriteLog (int argc, char **argv, PARAM &cPar); +}; + + +#endif + -- cgit v1.2.3