From 56afbdbb119844345ffc1b9c6ff73af35e054816 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Thu, 1 Jul 2021 03:45:37 -0500
Subject: manual: minor formatting

---
 doc/manual.pdf | Bin 241449 -> 270399 bytes
 doc/manual.tex |   5 +++--
 2 files changed, 3 insertions(+), 2 deletions(-)

(limited to 'doc')

diff --git a/doc/manual.pdf b/doc/manual.pdf
index c602856..a057834 100644
Binary files a/doc/manual.pdf and b/doc/manual.pdf differ
diff --git a/doc/manual.tex b/doc/manual.tex
index 0a6210b..446b2f8 100644
--- a/doc/manual.tex
+++ b/doc/manual.tex
@@ -411,12 +411,13 @@ as 1 and major allele as 0. Missing genotypes are represented as
 ``NA'' values.
 
 One can use the following bash command (in one line) to generate
-BIMBAM mean genotype file from IMPUTE genotype files
+BIMBAM mean genotype file from IMPUTE genotype files \\
 (\url{http://www.stats.ox.ac.uk/~marchini/software/gwas/file_format.html})\cite{Howie:2009}:
 %
 \begin{verbatim}
 cat [impute filename] | awk -v s=[number of samples/individuals]
-'{ printf $2 "," $4 "," $5; for(i=1; i<=s; i++) printf "," $(i*3+3)*2+$(i*3+4); printf "\n" }'
+'{ printf $2 "," $4 "," $5; for(i=1; i<=s; i++) \
+    printf "," $(i*3+3)*2+$(i*3+4); printf "\n" }'
 > [bimbam filename]
 \end{verbatim}
 %
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