Commit Graph

  • 562958ac44
    Add genenetwork navbar, splash screen and config master Njagi Mwaniki 2021-01-16 12:38:09 +0300
  • 2b17d23c8e
    Add genenetwork header and footer Njagi Mwaniki 2021-01-16 12:36:43 +0300
  • 7ecbd6e33f version bump to 2.22.2 for release james hadfield 2021-01-14 09:27:32 +1300
  • a6c285a075 changelog james hadfield 2021-01-14 09:27:01 +1300
  • bd2401f86a
    Merge pull request #1263 from nextstrain/webpack-hash james hadfield 2021-01-14 09:22:37 +1300
  • 32523b53dd Update webpack chunk-hash-generation settings james hadfield 2021-01-13 22:23:26 +1300
  • 08133c2a34 version bump to 2.22.1 for release james hadfield 2021-01-13 16:07:16 +1300
  • 5e5b507281 update package-lock JSON james hadfield 2021-01-13 14:26:04 +1300
  • c572b977f3 version bump to 2.22.0 for release james hadfield 2021-01-11 18:18:52 +1300
  • 16130b65f7 changelog james hadfield 2021-01-11 18:12:57 +1300
  • cd30947220
    Merge pull request #1262 from nextstrain/animation-controls james hadfield 2021-01-11 17:58:20 +1300
  • 9bb067153d Change animation icons to lighter grey james hadfield 2021-01-11 17:52:41 +1300
  • 31815a0a7e
    Merge pull request #1261 from nextstrain/rotate-mapbox-token james hadfield 2021-01-11 17:38:26 +1300
  • fb938707e6 Allow map tile API address and attribution to be customised james hadfield 2021-01-11 16:40:20 +1300
  • 83d4e461f7
    Merge pull request #1260 from nextstrain/footer james hadfield 2021-01-11 15:27:17 +1300
  • b2c8a6543b add docs re: sharing source code modifications james hadfield 2021-01-11 15:15:04 +1300
  • 624b0c8d6e Move animation controls to the sidebar Trevor Bedford 2021-01-10 17:51:41 -0800
  • a466dac68c Deduplicate "powered by" code james hadfield 2021-01-11 14:46:24 +1300
  • b0ece60414 Rotate Mapbox API token Trevor Bedford 2021-01-10 15:57:20 -0800
  • e26f776d1b Streamline footer for dataset listing Trevor Bedford 2021-01-10 14:53:25 -0800
  • 4d15bcd365 Split Footer and FinePrint components Trevor Bedford 2021-01-10 13:34:44 -0800
  • 095ed3426e Remove custom logic for hiding sidebar when pathname includes gisaid Trevor Bedford 2021-01-10 12:29:02 -0800
  • 53bd63c065 Update footer to include "Powered by" language Trevor Bedford 2021-01-10 12:19:48 -0800
  • 11215b0442 version bump to 2.21.0 for release james hadfield 2021-01-06 15:55:15 +1300
  • 1828527e77 changelog james hadfield 2021-01-06 15:54:23 +1300
  • a5207f23a3
    Merge pull request #1258 from nextstrain/disable-smoke-tests james hadfield 2021-01-06 14:14:52 +1300
  • 6af08dd692 disable (broken) smoke test for /ncov/global james hadfield 2021-01-06 11:43:41 +1300
  • 66516587d0
    Merge pull request #1257 from nextstrain/zoom-to-selected james hadfield 2021-01-06 13:26:19 +1300
  • cefefb90e9
    Merge pull request #1256 from h-astephan/master james hadfield 2021-01-06 11:23:28 +1300
  • 9c11067e55
    Merge pull request #1249 from nextstrain/adjust-branch-labels james hadfield 2021-01-06 10:40:25 +1300
  • 1541b75338 [bugfix] allow legend filtering to work with genotype colorings james hadfield 2020-12-22 14:23:11 +1300
  • 5483e2e685 Merge branch 'pull/1150' james hadfield 2021-01-06 10:25:53 +1300
  • 7c8a08a8aa
    Merge pull request #1237 from nextstrain/color-scale-unknown-val james hadfield 2021-01-06 09:42:50 +1300
  • 309cd06f4b
    Merge pull request #1246 from nextstrain/tip-label-source james hadfield 2021-01-06 09:42:22 +1300
  • 0423d6f125
    Merge pull request #1244 from nextstrain/drag-drop-metadata-improvements james hadfield 2021-01-06 09:39:26 +1300
  • 0c70781b6b
    Merge pull request #1245 from nextstrain/download-improvements james hadfield 2021-01-06 09:39:05 +1300
  • 9c15c4abed Add documentation describing additional metadata capabilities james hadfield 2020-12-15 13:26:38 +1300
  • c1122a86b6 Allow additional metadata to define geographic locations james hadfield 2020-12-15 11:27:19 +1300
  • e43feb3979 [metadata csv] allow colour and color spellings james hadfield 2021-01-05 17:49:20 +1300
  • e0de23f04c Add coloring & filter for samples in added metadata james hadfield 2020-12-11 19:28:20 +1300
  • 0b0c01b156 Downloaded tree units represent current view james hadfield 2020-12-18 07:52:46 +1300
  • 0259bb2077 Tree: add margin between zoom and reset buttons Jover 2020-12-29 13:14:18 -0800
  • 6d56082e6e Add "Zoom to Selected" button Jover 2020-12-22 19:13:31 -0800
  • 016d14dbce Refactor calcVisibility into smaller functions Jover 2020-12-22 19:07:13 -0800
  • 2a387f2cc3 Update hideNodesAboveVisibleCommonAncestor() to return index of LCA Jover 2020-12-22 18:40:11 -0800
  • 413dac1a92
    update language.js h-astephan 2020-12-28 15:26:53 -0800
  • dbe0a7e2ed
    add italian h-astephan 2020-12-28 15:24:40 -0800
  • 727d87a86c Rename function `hideNodeIfOnlyONeChildVisbile` Jover 2020-12-21 10:55:46 -0800
  • 0e55b3022d Allow tip labels to be user selected james hadfield 2020-12-18 16:34:25 +1300
  • e83e5ffcdf only show amino acids on branches leading to big clades Richard Neher 2020-12-19 21:21:12 +0100
  • 2332920cda Update filters to hide ancestral nodes before last common ancestor Jover 2020-12-18 16:21:32 -0800
  • 9f3561fa07 Allow NEXUS export with all colorings included as annotations james hadfield 2020-12-17 16:13:14 +1300
  • 9681c1f66d Downloaded files now represent selected (displayed) data. 2/2 james hadfield 2020-12-16 14:23:58 +1300
  • 021df4cb39 Downloaded files now represent selected (displayed) data. 1/2 james hadfield 2020-12-16 13:06:28 +1300
  • 829ef23457 Remap key "d" to open download modal james hadfield 2020-12-15 18:56:12 +1300
  • f6b46f798a Refactor Download Buttons code james hadfield 2020-12-15 18:52:17 +1300
  • 95dc21b6b7
    Merge pull request #1234 from nextstrain/warn-fetched-docs james hadfield 2020-12-15 14:44:40 +1300
  • 9bb7676078 interpret column header suffixes and allow custom colors james hadfield 2020-12-11 18:42:43 +1300
  • 12ba6195fa Refactor parsing of additional metadata files james hadfield 2020-12-11 17:41:23 +1300
  • 3144a0da2e Refactor individual colorScales into functions james hadfield 2020-12-11 13:50:11 +1300
  • 04e0f32084 Refactor error handling in color scale creation james hadfield 2020-12-11 13:18:30 +1300
  • aa32c77e21 Begin to add tests for color scales james hadfield 2020-12-11 12:48:25 +1300
  • 6bc34daf04 [bugfix] handle unknown values in color scales with provided scales james hadfield 2020-11-30 13:57:11 +1300
  • c3fe29f9e7 Add warning to docs fetched by docs.nextstrain.org eharkins 2020-11-20 12:13:41 -0800
  • 6a2d0f276f Merge branch 'master' of https://github.com/nextstrain/auspice eharkins 2020-11-19 14:05:37 -0800
  • 45f164636c point to auspice stable docs instead of latest eharkins 2020-11-19 14:05:04 -0800
  • 06e6f8b493 version bump to 2.20.1 for release james hadfield 2020-11-19 16:15:13 +1300
  • 2b0db53f28 changelog james hadfield 2020-11-19 16:09:57 +1300
  • 868179b1b6
    Merge pull request #1232 from nextstrain/filter-ui-perf james hadfield 2020-11-19 16:07:28 +1300
  • 802e51ffd8
    Merge pull request #1231 from nextstrain/styling james hadfield 2020-11-19 15:38:00 +1300
  • 8d39af06e3 Improve performance of sidebar filter UI james hadfield 2020-11-19 15:25:14 +1300
  • 7020950421 CSS fix for safari compatibility james hadfield 2020-11-19 13:46:03 +1300
  • 982d43bfff Update sidebar info icon to medium gray Trevor Bedford 2020-11-18 10:39:37 -0800
  • 8e5793e0ae version bump to 2.20.0 for release james hadfield 2020-11-18 16:33:17 +1300
  • 18e36cb9c8 changelog james hadfield 2020-11-18 16:32:38 +1300
  • f9be5b521c
    Merge pull request #1200 from nextstrain/filters james hadfield 2020-11-18 16:17:23 +1300
  • 5914192c44 Add react-tooltip to vendors bundle james hadfield 2020-11-18 15:58:04 +1300
  • 43d9b055b3
    Merge pull request #1229 from nextstrain/date-labels james hadfield 2020-11-18 15:53:41 +1300
  • 12f489d32a [filters] minor fixes james hadfield 2020-11-18 15:27:46 +1300
  • 213c56261f
    Merge pull request #1226 from nextstrain/fetch-no-content james hadfield 2020-11-18 15:43:29 +1300
  • 3a3f111b29 [phyloTree] Tweak grid display parameters Trevor Bedford 2020-11-16 09:32:56 -0800
  • becfaade55 Improve temporal axis labelling james hadfield 2020-11-12 11:23:44 +1300
  • 49895ac81a Add tooltips to indicate how filters are working james hadfield 2020-11-06 17:52:23 +1300
  • 59ae3146b2 [filters] use stripes to indicate inactive filter james hadfield 2020-11-18 13:34:54 +1300
  • cb170bbbb8 Modify display of filter badges james hadfield 2020-11-06 17:38:00 +1300
  • 78276bfca7 Display active filter summary below filter box UI james hadfield 2020-11-06 17:20:12 +1300
  • ece581dc4d Remove the search-strains UI james hadfield 2020-11-06 15:39:07 +1300
  • b2a69809fb Allow strains to be searched as normal filters james hadfield 2020-11-06 15:31:14 +1300
  • a430ef6cf4 Allow filters to be displayed but inactive james hadfield 2020-10-27 15:55:41 +1300
  • 5a5d20ce63 README and DEV_DOCS update to reflect new docs eharkins 2020-11-12 15:18:59 -0800
  • b3ae796e2a Merge branch 'migrate-docs' james hadfield 2020-11-12 13:13:53 +1300
  • 090c16c2fd Update docs URLs james hadfield 2020-11-12 13:08:12 +1300
  • 2d9353a78d fix docs links, remove narratives index page eharkins 2020-11-11 15:46:03 -0800
  • 1be473fa94 [fetch-docs] relative link -> absolute eharkins 2020-11-07 14:18:57 -0800
  • 16ab6cde02 [fetch-docs] relative links eharkins 2020-11-07 13:55:26 -0800
  • 16748657f2 [fetch-docs] relative links eharkins 2020-11-07 13:52:46 -0800
  • 87e1cd906f fix link to work when doc fetched by main rtd eharkins 2020-11-07 13:44:09 -0800
  • a63f7c7459 Merge branch 'migrate-docs' of https://github.com/nextstrain/auspice into migrate-docs eharkins 2020-11-05 19:40:08 -0800
  • 0e5ec804e9 exclude unused docs from build eharkins 2020-11-04 20:16:09 -0800
  • d652434b1e [docs] minor fixes james hadfield 2020-11-04 14:36:31 +1300