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changelog & version bump to 2.0.0

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james hadfield 3 years ago
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dcd16bcedc
  1. 39
      CHANGELOG.md
  2. 5
      README.md
  3. 2
      package.json
  4. 2
      src/version.js

39
CHANGELOG.md

@ -2,7 +2,46 @@
title: Changelog
---
## version 2.0.0 - 2019/10/21
Please see the [release notes](https://nextstrain.github.io/auspice/releases/v2) for a full list of features and changes associated with auspice's v2 release.
Associated with the v2 release are much improved documentation at [nextstrain.github.io/auspice](https://nextstrain.github.io/auspice)
Here is a summary of the main changes:
* Pie charts to represent discrete variables on a map
* New dataset JSON format:
* Strings parsed unchanged
* Both metadata and tree data in a single JSON
* Gene / Genome definitions are now in GFF format
* Changes to how node data is stored
* Multiple maintainers
* Continous, Categorical, Ordinal, and Boolean Color Scales
* More information in tree info boxes
* Display of second trees
* Display better dates on the tree axis
* Map "reset zoom" button zooms to include all demes
* Consistent colouring of missing data in the tree
* Removal of Twitter & Google Analytics
* Improvements in the entropy panel
* Auspice responds to server redirects for datasets
* Importing (server) code from Auspice
* New Auspice subcommand: `auspice convert`
* Ability to show a "build" source URL in the sidebar
* `auspice view` uses a custom Auspice client if present
## version 1.39.1 - 2019/10/21
This release marks the final v1 release before auspice v2 is released.
Auspice v1 may still receive bug-fixes, and will be [npm-tagged](https://docs.npmjs.com/cli/dist-tag) with "version1" so that it may be installed via `npm install --global auspice@version1`.
* Minor dependency version upgrades.
## version 1.39.0 - 2019/09/12
* Slight changes to the auspice splash page wording to remove the word "Locally".
* `getDataset` API calls may now return code 204 ("no content") resulting in the auspice splash page displayed without an error message.
* Default styling of narrative text much improved.
## version 1.38.2 - 2019/09/06

5
README.md

@ -8,7 +8,6 @@ We provide a continually-updated view of publicly available data with powerful a
Our goal is to aid epidemiological understanding and improve outbreak response.
Resulting data and inferences are available live at the website [nextstrain.org](https://nextstrain.org).
Documentation is available at [nextstrain.org/docs](https://nextstrain.org/docs).
# Auspice
@ -20,7 +19,7 @@ Auspice may be used to explore datasets locally or run as a as a server to share
## Documentation
**Please see [nextstrain.github.io/auspice](https://nextstrain.github.io/auspice) for auspice-specific documentation or [nextstrain.org/docs](https://nextstrain.org/docs/) for more general documentation.**
**Please see [nextstrain.github.io/auspice](https://nextstrain.github.io/auspice) for auspice documentation.**
## Installation
@ -29,7 +28,7 @@ Auspice may be used to explore datasets locally or run as a as a server to share
npm install --global auspice
```
See [here](https://nextstrain.github.io/auspice/installation) for full instructions, including how to install from source.
See [here](https://nextstrain.github.io/auspice/introduction/install) for full instructions, including how to install from source.
## Quickstart

2
package.json

@ -1,6 +1,6 @@
{
"name": "auspice",
"version": "2.0.0-beta.2",
"version": "2.0.0",
"description": "Web app for visualizing pathogen evolution",
"author": "James Hadfield, Trevor Bedford and Richard Neher",
"license": "AGPL-3.0-only",

2
src/version.js

@ -1,4 +1,4 @@
const version = "2.0.0-beta.2";
const version = "2.0.0";
module.exports = {
version

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