From 94f6951f33dd801d30afcd9e547498345a7f1f1d Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Wed, 26 Jan 2022 18:45:25 +0530
Subject: gn: genenetwork: Disable tests on python-seaborn.

* gn/packages/genenetwork.scm (python-seaborn-without-tests,
python-pingouin-with-working-python-seaborn): New variables.
(genenetwork3)[propagated-inputs]: Replace python-pingouin with
python-pingouin-with-working-python-seaborn.
---
 gn/packages/genenetwork.scm | 17 ++++++++++++++++-
 1 file changed, 16 insertions(+), 1 deletion(-)

(limited to 'gn')

diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index e6633de..69ba99e 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -98,6 +98,21 @@
       (description "Reimplementation of genenetwork/QTLReaper in Rust")
       (license #f))))
 
+;; Tests on the upstream python-seaborn package are broken. So, we
+;; create this temporary workaround.
+(define python-seaborn-without-tests
+  (package
+    (inherit python-seaborn)
+    (arguments
+     (substitute-keyword-arguments (package-arguments python-seaborn)
+       ((#:tests? _ #f) #f)))))
+
+(define python-pingouin-with-working-python-seaborn
+  (package
+    (inherit python-pingouin)
+    (propagated-inputs
+     `(("python-seaborn" ,python-seaborn-without-tests)
+       ,@(alist-delete "python-seaborn" (package-propagated-inputs python-pingouin))))))
 
 (define-public genenetwork3
   (let ((commit "784447b17d85a618005ac9acfc57f5b7ef8f5169"))
@@ -129,7 +144,7 @@
                            ("python-mysqlclient" ,python-mysqlclient)
                            ("python-numpy" ,python-numpy)
                            ("python-pandas" ,python-pandas)
-                           ("python-pingouin" ,python-pingouin)
+                           ("python-pingouin" ,python-pingouin-with-working-python-seaborn)
                            ("python-plotly" ,python-plotly)
                            ("python-pylint" ,python-pylint)
                            ("python-redis" ,python-redis)
-- 
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