From 4a8d467bcf0024960f3b88842be32a64f610c022 Mon Sep 17 00:00:00 2001
From: pjotrp
Date: Mon, 1 Apr 2024 11:42:19 +0200
Subject: gn: genenetwork3: sorted package names and added R to propagated
 inputs to make Rscript available on the path

* gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add r.
---
 gn/packages/genenetwork.scm | 17 +++++++++--------
 1 file changed, 9 insertions(+), 8 deletions(-)

(limited to 'gn/packages')

diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index ce99066..e439fdd 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -140,9 +140,13 @@
        (list gemma-wrapper
              python-wrapper
              csvdiff
+             diffutils
              gn-rust-correlation
-             python-bcrypt ;; Replace use of bcrypt with argon below
+             python-authlib
              python-argon2-cffi
+             python-bcrypt ;; Replace use of bcrypt with argon
+             python-biopython
+             python-email-validator
              python-flask
              python-flask-cors
              python-lmdb
@@ -152,24 +156,21 @@
              python-pingouin-without-tests
              python-plotly
              python-pyld
-             python-scikit-learn
              python-pymonad
              python-redis
              python-requests
+             python-scikit-learn
              python-scipy
-             python-authlib
              python-sparqlwrapper
-             python-email-validator
              python-xapian-bindings
-             python-biopython
+             r
+             r-ctl
              r-optparse
              r-qtl
              r-rjson
              r-stringi
              r-wgcna
-             r-ctl
-             rust-qtlreaper
-             diffutils))
+             rust-qtlreaper))
       (build-system python-build-system)
       (arguments
        (list #:phases
-- 
cgit v1.2.3