From 3d6be821a8085cddf0e9011a99a386daa15d0cc6 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Fri, 22 May 2020 06:55:02 -0500
Subject: Swapping mysql for mariadb

---
 gn/packages/gemma.scm       | 1 +
 gn/packages/genenetwork.scm | 6 +++---
 2 files changed, 4 insertions(+), 3 deletions(-)

(limited to 'gn/packages')

diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm
index d602679..9bbc960 100644
--- a/gn/packages/gemma.scm
+++ b/gn/packages/gemma.scm
@@ -166,6 +166,7 @@
     (native-inputs ; for running tests
      `(("perl" ,perl)
        ("which" ,which)
+       ; ("gcc@8" ,gcc-8)
        ))
 
     (build-system gnu-build-system)
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 8696db0..4bd5c94 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -100,7 +100,7 @@
     (propagated-inputs
      `(("python" ,python)
        ("elixir" ,elixir)
-       ("mysql" ,mysql)
+       ("mariadb" ,mariadb)
        ("gnu-make" ,gnu-make) ; needed for mysqlex
        ))
     (arguments
@@ -262,7 +262,7 @@ location of a putative QTL.")
        ("r-qtl" ,r-qtl)
        ("r-wgcna" ,r-wgcna)
        ("redis" ,redis)
-       ("mysql" ,mysql)
+       ("mariadb" ,mariadb)
        ("gemma" ,gemma-gn2-git)
        ("gemma-wrapper" ,gemma-wrapper)
        ; ("genenetwork2-files-small" ,genenetwork2-files-small)
@@ -489,7 +489,7 @@ written in C")
         ("r-ctl" ,r-ctl)
         ("r-qtl" ,r-qtl)
         ("redis" ,redis)
-        ("mysql" ,mysql)
+        ("mariadb" ,mariadb)
         ("nginx" ,nginx)
         ("r-wgcna" ,r-wgcna)
         ;; ("r-phewas" ,r-phewas)
-- 
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