From 8cb0d77354b82dcc7a6579b97604f41b34a789f0 Mon Sep 17 00:00:00 2001
From: BonfaceKilz
Date: Tue, 12 Jan 2021 22:43:59 +0300
Subject: gn: genenetwork1: Create "useralt" and replace "user" with it

* gn/packages/genenetwork.scm (genenetwork1):
[arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to
"web/webqtl/useralt" and replace how "user" is imported in
"web/webqtl/main.py"
---
 gn/packages/genenetwork.scm | 7 +++++++
 1 file changed, 7 insertions(+)

(limited to 'gn/packages/genenetwork.scm')

diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 4173157..e8c11a7 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -772,6 +772,13 @@ written in C")
                  (symlink "/gnshare/gn/web/genotypes" "web/genotypes")
                  (substitute* "web/webqtl/base/webqtlConfig.py"
                    (("http://www.genenetwork.org") "http://gn1-test.genenetwork.org"))
+                 ;; Inside the gn1 container, there's some conflict when
+                 ;; importing the user module, therefore, as a hack, rename
+                 ;; user to useralt
+                 (mkdir "web/webqtl/useralt")
+                 (copy-recursively "web/webqtl/user" "web/webqtl/useralt")
+                 (substitute* '("web/webqtl/main.py")
+                   (("from user import") "from useralt import"))
                  #t)))
            (add-after 'unpack 'use-local-links
              (lambda _
-- 
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