From cc8ee17a6e63cf20adc9374735a1322dd9c7f88e Mon Sep 17 00:00:00 2001 From: Efraim Flashner Date: Wed, 16 Nov 2022 14:56:36 +0200 Subject: gn: Add graph-genotyper and dependent packages --- gn/packages/crates-io.scm | 135 +++++++++++++++++++++++++++++++++++++++++++++- 1 file changed, 134 insertions(+), 1 deletion(-) (limited to 'gn/packages/crates-io.scm') diff --git a/gn/packages/crates-io.scm b/gn/packages/crates-io.scm index 847b2ef..8b7bc4c 100644 --- a/gn/packages/crates-io.scm +++ b/gn/packages/crates-io.scm @@ -7,7 +7,8 @@ #:use-module (guix build-system cargo) #:use-module (gnu packages crates-graphics) #:use-module (gnu packages crates-io) - #:use-module (gnu packages maths)) + #:use-module (gnu packages maths) + #:use-module (gnu packages python)) (define-public rust-bgzip-0.2 (package @@ -65,6 +66,25 @@ for massive key sets}. It generates an @acronym{MPHF, minimal perfect hash functions} for a collection of hashable objects.") (license license:expat))) +(define-public rust-clap-lex-0.3 + (package + (name "rust-clap-lex") + (version "0.3.0") + (source (origin + (method url-fetch) + (uri (crate-uri "clap-lex" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1a4dzbnlxiamfsn0pnkhn7n9bdfjh66j9fxm6mmr7d227vvrhh8d")))) + (build-system cargo-build-system) + (arguments + `(#:cargo-inputs (("rust-os-str-bytes" ,rust-os-str-bytes-6)))) + (home-page "https://github.com/clap-rs/clap/tree/master/clap_lex") + (synopsis "Minimal, flexible command line parser") + (description "Minimal, flexible command line parser") + (license (list license:expat license:asl2.0)))) + (define-public rust-cuckoofilter-0.5 (package (name "rust-cuckoofilter") @@ -352,6 +372,51 @@ Python code from a Rust binary is also supported.") (description "This package provides succinct data structures for Rust.") (license (list license:expat license:asl2.0)))) +(define-public rust-terminal-size-0.2 + (package + (name "rust-terminal-size") + (version "0.2.2") + (source (origin + (method url-fetch) + (uri (crate-uri "terminal-size" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0yhza8sc6jkka6j0nq5sl749ckx1jagvxp3b38yhh4px6k291jj0")))) + (build-system cargo-build-system) + (arguments + `(#:skip-build? #t + ;#:cargo-inputs + ;(("rust-rustix" ,rust-rustix-0.35) + ; ("rust-windows-sys" ,rust-windows-sys-0.42)) + )) + (home-page "https://github.com/eminence/terminal-size") + (synopsis "Gets the size of your Linux or Windows terminal") + (description "Gets the size of your Linux or Windows terminal") + (license (list license:expat license:asl2.0)))) + +(define-public rust-unic-emoji-char-0.9 + (package + (name "rust-unic-emoji-char") + (version "0.9.0") + (source (origin + (method url-fetch) + (uri (crate-uri "unic-emoji-char" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0ka9fr7s6lv0z43r9xphg9injn35pfxf9g9q18ki0wl9d0g241qb")))) + (build-system cargo-build-system) + (arguments + `(#:cargo-inputs + (("rust-unic-char-property" ,rust-unic-char-property-0.9) + ("rust-unic-char-range" ,rust-unic-char-range-0.9) + ("rust-unic-ucd-version" ,rust-unic-ucd-version-0.9)))) + (home-page "https://github.com/open-i18n/rust-unic/") + (synopsis "UNIC â Unicode Emoji â Emoji Character Properties") + (description "UNIC â Unicode Emoji â Emoji Character Properties") + (license (list license:expat license:asl2.0)))) + (define-public rust-clap-for-jrep (package (name "rust-clap") @@ -499,6 +564,48 @@ or any combination.") Argument Parser") (license (list license:expat license:asl2.0)))) +(define-public rust-clap-4 + (package + (name "rust-clap") + (version "4.0.9") + (source (origin + (method url-fetch) + (uri (crate-uri "clap" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1w0dxqzrh449s9l2k8g66pdsff02599bwi5mh0gny3227kcpsq1h")))) + (build-system cargo-build-system) + (arguments + `(#:cargo-inputs + (("rust-atty" ,rust-atty-0.2) + ("rust-backtrace" ,rust-backtrace-0.3) + ("rust-bitflags" ,rust-bitflags-1) + ("rust-clap-derive" ,rust-clap-derive-4) + ("rust-clap-lex" ,rust-clap-lex-0.3) + ("rust-once-cell" ,rust-once-cell-1) + ("rust-strsim" ,rust-strsim-0.10) + ("rust-termcolor" ,rust-termcolor-1) + ("rust-terminal-size" ,rust-terminal-size-0.2) + ("rust-unicase" ,rust-unicase-2) + ("rust-unicode-width" ,rust-unicode-width-0.1)) + #:cargo-development-inputs + (("rust-humantime" ,rust-humantime-2) + ("rust-rustversion" ,rust-rustversion-1) + ("rust-shlex" ,rust-shlex-1) + ("rust-snapbox" ,rust-snapbox-0.4) + ("rust-static-assertions" ,rust-static-assertions-1) + ("rust-trybuild" ,rust-trybuild-1) + ("rust-trycmd" ,rust-trycmd-0.13) + ("rust-unic-emoji-char" ,rust-unic-emoji-char-0.9)))) + (home-page "https://github.com/clap-rs/clap") + (synopsis + "A simple to use, efficient, and full-featured Command Line Argument Parser") + (description + "This package provides a simple to use, efficient, and full-featured Command Line + Argument Parser") + (license (list license:expat license:asl2.0)))) + ;; ready to upstream, WITH rust-clap-derive ;; replace fields with those from upstream. (define-public rust-clap-derive-3.1 @@ -527,6 +634,32 @@ or any combination.") "Parse command line argument by defining a struct, derive crate.") (license (list license:expat license:asl2.0)))) +(define-public rust-clap-derive-4 + (package + (name "rust-clap-derive") + (version "4.0.9") + (source (origin + (method url-fetch) + (uri (crate-uri "clap-derive" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "02zhbbmyz3dpy9ml6xfp7i8p3ffj1djvkdnkg6gr6d0s5r4hg8x4")))) + (build-system cargo-build-system) + (arguments + `(#:cargo-inputs + (("rust-heck" ,rust-heck-0.4) + ("rust-proc-macro-error" ,rust-proc-macro-error-1) + ("rust-proc-macro2" ,rust-proc-macro2-1) + ("rust-quote" ,rust-quote-1) + ("rust-syn" ,rust-syn-1)))) + (home-page "https://github.com/clap-rs/clap/tree/master/clap_derive") + (synopsis + "Parse command line argument by defining a struct, derive crate.") + (description + "Parse command line argument by defining a struct, derive crate.") + (license (list license:expat license:asl2.0)))) + (define-public rust-textwrap-0.15 (package (name "rust-textwrap") -- cgit v1.2.3