From a66e0cbedda4927d9546829e162d08d03bb667da Mon Sep 17 00:00:00 2001
From: Efraim Flashner
Date: Wed, 22 Mar 2023 14:49:00 +0200
Subject: bh20-seq-resource: Add version without profile collisions.

* gn/packages/bioinformatics.scm (bh20-seq-resource-for-service): New
variable.
* gn/services/bh20-seq-resource-container.scm
(covid19-pubseq-configuration): Use it by default.
---
 gn/packages/bioinformatics.scm | 12 ++++++++++++
 1 file changed, 12 insertions(+)

(limited to 'gn/packages/bioinformatics.scm')

diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index b94f537..0e6caf0 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -1852,6 +1852,18 @@ it to upload the genomes of SARS-CoV-2 samples to make them publicly and freely
 available to other researchers.")
       (license license:asl2.0))))
 
+;; This version has no profile collisions.
+(define-public bh20-seq-resource-for-service
+  (package
+    ;(inherit (fix-profile-collisions-for-bh20 bh20-seq-resource))
+    (inherit
+      ((package-input-rewriting/spec
+        `(("python-google-api-core" . ,(const python-google-api-core-1))
+          ("python-google-auth" . ,(const python-google-auth-1))
+          ("python-pyparsing" . ,(const python-pyparsing-2.4.7))))
+       bh20-seq-resource))
+    (properties `((hidden? . #t)))))
+
 (define-public python-scanpy-git
   (let ((commit "590d42309f9ed6550d7b887039990edfc1ac7648") ; April 22, 2020
         (revision "1"))
-- 
cgit v1.2.3