From 8ceb607527db5132b6106325b848f38502cecd5d Mon Sep 17 00:00:00 2001
From: Efraim Flashner
Date: Wed, 13 Jan 2021 02:01:12 -0600
Subject: gn: update ratspub to 0.4.5.

---
 gn/packages/javascript.scm | 16 ++++++++++++++++
 gn/packages/ratspub.scm    |  9 ++++++---
 2 files changed, 22 insertions(+), 3 deletions(-)

diff --git a/gn/packages/javascript.scm b/gn/packages/javascript.scm
index 83b5ba1..cef9393 100644
--- a/gn/packages/javascript.scm
+++ b/gn/packages/javascript.scm
@@ -85,6 +85,22 @@ for programmers and scientists to use graph theory in their apps, whether it's
 for server-side analysis in a Node.js app or for a rich user interface.")
     (license license:expat)))
 
+(define-public javascript-cytoscape-3.17
+  (package
+    (inherit javascript-cytoscape)
+    (name "javascript-cytoscape")
+    (version "3.17.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cytoscape/cytoscape.js")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32
+         "0fp4bv3gq9vj0517h61jvg7bxk8fyrhrq0jr1v4d0lzp164sgxln"))))))
+
 (define-public javascript-cytoscape-2
   (package
     (inherit javascript-cytoscape)
diff --git a/gn/packages/ratspub.scm b/gn/packages/ratspub.scm
index 07b7d84..85c73c7 100644
--- a/gn/packages/ratspub.scm
+++ b/gn/packages/ratspub.scm
@@ -20,7 +20,7 @@
 (define-public ratspub
   (package
     (name "ratspub")
-    (version "0.4.3")
+    (version "0.4.5")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -35,7 +35,7 @@
                        #t))
               (sha256
                (base32
-                "03v1nk58yhi7rsy6b23hlc1xd5i6lvqla25r9l4b1jcmzraaci8l"))))
+                "1y89rkqdxcnl2jjsy1wfp9p8qkgh6nzqs1r37wyhc8y7r3dva7kf"))))
     (build-system python-build-system)
     (arguments
      `(#:tests? #f  ; no test suite
@@ -43,6 +43,9 @@
        (modify-phases %standard-phases
          (delete 'configure)
          (delete 'build)
+         (add-after 'unpack 'make-files-writable
+           (lambda _
+             (for-each make-file-writable (find-files "."))))
          (add-after 'unpack 'patch-datadir
            (lambda _
              (substitute* "server.py"
@@ -129,7 +132,7 @@
        ("tensorflow" ,tensorflow)))
     (native-inputs
      `(("bootstrap" ,web-bootstrap)
-       ("cytoscape" ,javascript-cytoscape)
+       ("cytoscape" ,javascript-cytoscape-3.17)
        ;("cytoscape-svg" ,js-cytoscape-svg-0.3.1)   ; TODO
        ("cytoscape-svg" ,js-cytoscape-svg-vendor-0.3.1)
        ("font-awesome" ,web-font-awesome)
-- 
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