From 4482bc32c6bba22aa4e27957410987c552dc2def Mon Sep 17 00:00:00 2001 From: Efraim Flashner Date: Sun, 24 Jan 2021 13:40:09 +0200 Subject: gn: bio-vcf upstreamed --- gn/packages/ruby.scm | 26 -------------------------- 1 file changed, 26 deletions(-) diff --git a/gn/packages/ruby.scm b/gn/packages/ruby.scm index 4aec059..8ad537a 100644 --- a/gn/packages/ruby.scm +++ b/gn/packages/ruby.scm @@ -95,32 +95,6 @@ a focus on simplicity and productivity.") (home-page "https://ruby-lang.org") (license license:ruby))) -(define-public bio-vcf ; guix ready, minus tests not passing - (package - (name "bio-vcf") - (version "0.9.4") - (source - (origin - (method url-fetch) - (uri (rubygems-uri "bio-vcf" version)) - (sha256 - (base32 - "1xpll1pnpr5jxjdyydfw79ydz6l6lfhy6fg2gys8s3my9vwaf3ld")))) - (build-system ruby-build-system) - (native-inputs - `(("ruby-cucumber" ,ruby-cucumber) - ("ruby-rake" ,ruby-rake))) - (synopsis "Smart VCF parser DSL") - (description - "Bio-vcf provides a @acronym{DSL, domain specific language} for processing -the VCF format. Record named fields can be queried with regular expressions. -Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not -only very fast for genome-wide (WGS) data, it also comes with a filtering, -evaluation and rewrite language and can output any type of textual data, -including VCF header and contents in RDF and JSON.") - (home-page "http://github.com/vcflib/bio-vcf") - (license license:expat))) - (define-public bio-table ; guix ready with tests (package (name "bio-table") -- cgit v1.2.3