From 3d81b81500bca24e46bf83eb9750bdec19dd6862 Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Mon, 29 Feb 2016 16:03:40 +0100 Subject: Reverted htslib for Sambamba to the repository's version. --- gn/packages/bioinformatics.scm | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index cf79a08..3d27a72 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -495,11 +495,14 @@ and freshness without requiring additional information from the user.") ("htslib-src" ,(origin (method url-fetch) - (uri "https://github.com/samtools/htslib/archive/1.3.tar.gz") - (file-name "htslib-1.3.tar.gz") + (uri (string-append "https://github.com/lomereiter/htslib/archive/" + "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5" ".tar.gz")) + ;;(uri "https://github.com/samtools/htslib/archive/1.3.tar.gz") + (file-name "htslib-2f3c3ea7b.tar.gz") (sha256 - (base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9")) - (patches (list (search-patch "htslib-add-cram_to_bam.patch"))))) + (base32 "0bl6w856afnbgdsw8bybsxpqsyf2ba3f12rqh47hhpxvv866g08w")))) + ;;(base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9")) + ;;(patches (list (search-patch "htslib-add-cram_to_bam.patch"))))) ("biod-src" ,(origin (method git-fetch) -- cgit v1.2.3