| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2023-09-24 | pggb: Remove python-pycairo | Efraim Flashner | |
| 2023-09-24 | rtg-tools: Use a smaller java implementation | Efraim Flashner | |
| 2023-09-24 | pggb: Add htslib for tabix dependency. | Efraim Flashner | |
| 2023-09-22 | Add pggb. | Efraim Flashner | |
| 2023-09-22 | vg: Prepare for using a shared library. | Efraim Flashner | |
| 2023-09-22 | vg: Update to 1.50.0. | Efraim Flashner | |
| 2023-09-21 | rtg: Update package definition. | Efraim Flashner | |
| 2023-09-21 | mummer: Update to 4.0.0rc1. | Efraim Flashner | |
| 2023-09-21 | odgi: Add variant with glibc-hwcaps. | Efraim Flashner | |
| 2023-09-21 | wfmash: Fix typos. | Efraim Flashner | |
| 2023-09-21 | odgi: Update to 0.8.3. | Efraim Flashner | |
| 2023-09-21 | Add smoothxg | Efraim Flashner | |
| 2023-09-20 | seqwish: Update to 0.7.9. | Efraim Flashner | |
| 2023-09-20 | gn: genenetwork2: Add htmx. | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add htmx. | |||
| 2023-09-20 | gn: javascript: Add htmx. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-htmx): Add htmx. | |||
| 2023-09-20 | remove crates existing upstream | Efraim Flashner | |
| 2023-09-20 | Add wfmash with glibc-hwcap libraries. | Efraim Flashner | |
| 2023-09-19 | Add pafplot | Efraim Flashner | |
| 2023-09-19 | Add fastix | Efraim Flashner | |
| 2023-09-19 | Add vcfbub | Efraim Flashner | |
| 2023-09-19 | gfaffix: Update to 0.1.5. | Efraim Flashner | |
| 2023-09-19 | Update gem5 | Efraim Flashner | |
| 2023-09-19 | Update pluto notebook service and julia packages | Efraim Flashner | |
| 2023-09-19 | remove unneeded module import | Efraim Flashner | |
| 2023-09-19 | Update pluto server | Efraim Flashner | |
| 2023-09-19 | update julia-visuals | Efraim Flashner | |
| 2023-09-19 | Remove `rust-clap-4` | Frederick Muriuki Muriithi | |
| There is a `rust-clap-4` package upstream. | |||
| 2023-09-06 | gn: gn-auth: Update yoyo and mypy | Frederick Muriuki Muriithi | |
| Update yoyo and mypy to allow the use of Python-3.10 | |||
| 2023-09-05 | gn: genenetwork: Update mypy and yoyo | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm: Import (guix packages). (genenetwork3): Use yoyo-migrations v8.2.0 and python-mypy v0.981. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-05 | gn: python: Add python-mypy-0.981 | Munyoki Kilyungi | |
| * gn/packages/python.scm (python-mypy-0.981): New package. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-05 | gn: python: Add yoyo-migrations-8.2.0 | Munyoki Kilyungi | |
| * gn/packages/python.scm: Import (gnu packages databases) and (guix hg-download). (yoyo-migrations-8.2.0): New package. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-05 | Adjust how native/propagated inputs are defined for GN3 | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-05 | Update pinned guix version | Munyoki Kilyungi | |
| .guix-channel: Use guix at commit 8d70ff3a49f7cdf0eab93b3a1c54ec2f016afc4a. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Revert "Pin python to python@3.8.5" | Munyoki Kilyungi | |
| This reverts commit aaa6e53e7b623105d05e67e95186aba5b4671010. | |||
| 2023-09-04 | Remove guix-forge channel | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Specify default branch for forge channel | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Add trailing slash to forge url | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Fix channel introduction | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Fix channel introduction | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Fix channel introduction in guix-forge | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Add guix-forge as an extra channel dependency | Munyoki Kilyungi | |
| * .guix-channel: Add guix-forge. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Pin python to python@3.8.5 | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm: (genenetwork3, genenetwork2): Using python@3.8.5 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-31 | Move gn-auth to (gn packages genenetwork). | Arun Isaac | |
| 2023-08-31 | Downgrade guix to a4e9842. | Arun Isaac | |
| 2023-08-31 | Revert "Pin guix-bioinformatics to commit with Python-3.9" | Arun Isaac | |
| This reverts commit 0d743eb249bbdb67009d23ee53b2ee0ae881f725. | |||
| 2023-08-31 | Pin guix-bioinformatics to commit with Python-3.9 | Frederick Muriuki Muriithi | |
| A number of GeneNetwork services/applications will not run with Python-3.10. This commit pins guix-bioinformatics to a specific commit to allow use of the older Python-3.10 before we are able to update everything needed to get them running on Python-3.10 | |||
| 2023-08-30 | Replace `(...) with (list ...): Fixes "undefined gexp" failure. | Frederick Muriuki Muriithi | |
| Replace the backquoted expression in the (arguments ...) section of the package definition to fix the error where the build could not find the variable gexp | |||
| 2023-08-30 | Add missing `(guix gexp) module. Update package commit. | Frederick Muriuki Muriithi | |
| 2023-08-25 | gn-auth: New package | Frederick Muriuki Muriithi | |
| 2023-07-06 | Remove tissue. | Arun Isaac | |
| tissue is now in upstream Guix. * gn/packages/gemini.scm: Delete file. | |||
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
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