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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2017 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2014, 2015 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2015 Omar Radwan <toxemicsquire4@gmail.com>
;;; Copyright © 2015 Pierre-Antoine Rault <par@rigelk.eu>
;;; Copyright © 2015, 2016, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016 Christopher Allan Webber <cwebber@dustycloud.org>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
;;; Copyright © 2015, 2016 David Thompson <davet@gnu.org>
;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2015, 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com>
;;; Copyright © 2015, 2016, 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2017 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
;;; Copyright © 2016, 2018 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2016 Daniel Pimentel <d4n1@d4n1.org>
;;; Copyright © 2016 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2016, 2017 Troy Sankey <sankeytms@gmail.com>
;;; Copyright © 2016, 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016, 2017, 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016, 2017 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016, 2017, 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2016, 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2016, 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017 Carlo Zancanaro <carlo@zancanaro.id.au>
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017, 2018 Adriano Peluso <catonano@gmail.com>
;;; Copyright © 2017 Ben Sturmfels <ben@sturm.com.au>
;;; Copyright © 2017, 2018 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2017 José Miguel Sánchez García <jmi2k@openmailbox.org>
;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
;;; Copyright © 2017, 2018 Kei Kebreau <kkebreau@posteo.net>
;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
;;; Copyright © 2017 Brendan Tildesley <brendan.tildesley@openmailbox.org>
;;; Copyright © 2018 Ethan R. Jones <ethanrjones97@gmail.com
;;; Copyright © 2018 Fis Trivial <ybbs.daans@hotmail.com>
;;; Copyright © 2018 Vijayalakshmi Vedantham <vijimay12@gmail.com>
;;; Copyright © 2018 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2018 Adam Massmann <massmannak@gmail.com>
;;; Copyright © 2016, 2018 Tomáš Čech <sleep_walker@gnu.org>
;;; Copyright © 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018 Luther Thompson <lutheroto@gmail.com>
;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages python-xyz)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (gnu packages algebra)
#:use-module (gnu packages adns)
#:use-module (gnu packages attr)
#:use-module (gnu packages backup)
#:use-module (gnu packages bash)
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages crypto)
#:use-module (gnu packages databases)
#:use-module (gnu packages file)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc)
#:use-module (gnu packages geo)
#:use-module (gnu packages ghostscript)
#:use-module (gnu packages gl)
#:use-module (gnu packages glib)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages graphics)
#:use-module (gnu packages gstreamer)
#:use-module (gnu packages gtk)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages image)
#:use-module (gnu packages imagemagick)
#:use-module (gnu packages libevent)
#:use-module (gnu packages libffi)
#:use-module (gnu packages linux)
#:use-module (gnu packages llvm)
#:use-module (gnu packages man)
#:use-module (gnu packages maths)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages networking)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages openstack)
#:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-check)
#:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-web)
#:use-module (gnu packages qt)
#:use-module (gnu packages readline)
#:use-module (gnu packages sdl)
#:use-module (gnu packages search)
#:use-module (gnu packages shells)
#:use-module (gnu packages ssh)
#:use-module (gnu packages terminals)
#:use-module (gnu packages tex)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages time)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
#:use-module (gnu packages video)
#:use-module (gnu packages web)
#:use-module (gnu packages base)
#:use-module (gnu packages xml)
#:use-module (gnu packages xorg)
#:use-module (gnu packages xdisorg)
#:use-module (gnu packages tcl)
#:use-module (gnu packages bdw-gc)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (guix build-system python)
#:use-module (guix build-system trivial)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-26))
(define-public python-psutil
(package
(name "python-psutil")
(version "5.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "psutil" version))
(sha256
(base32
"063v69x7spyclyaxrd3gmzj3p16q5ayg97xqhwb1kyn22a9pwip2"))))
(build-system python-build-system)
(arguments
;; FIXME: some tests does not return and times out.
'(#:tests? #f))
(home-page "https://www.github.com/giampaolo/psutil")
(synopsis "Library for retrieving information on running processes")
(description
"psutil (Python system and process utilities) is a library for retrieving
information on running processes and system utilization (CPU, memory, disks,
network) in Python. It is useful mainly for system monitoring, profiling and
limiting process resources and management of running processes. It implements
many functionalities offered by command line tools such as: ps, top, lsof,
netstat, ifconfig, who, df, kill, free, nice, ionice, iostat, iotop, uptime,
pidof, tty, taskset, pmap.")
(properties `((python2-variant . ,(delay python2-psutil))))
(license license:bsd-3)))
(define-public python2-psutil
(let ((base (package-with-python2 (strip-python2-variant python-psutil))))
(package
(inherit base)
(propagated-inputs
`(("python2-enum34" ,python2-enum34) ;optional
,@(package-propagated-inputs base))))))
(define-public python-shapely
(package
(name "python-shapely")
(version "1.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Shapely" version))
(sha256
(base32
"0svc58dzcw9gj92b4sgq35sdxkf85z0qwlzxarkzq4bp3h8jy58l"))))
(build-system python-build-system)
(native-inputs
`(("python-cython" ,python-cython)
("python-matplotlib" ,python-matplotlib)
("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)))
(inputs
`(("geos" ,geos)))
(propagated-inputs
`(("python-numpy" ,python-numpy)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-geos-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((geos (assoc-ref inputs "geos"))
(glibc (assoc-ref inputs ,(if (%current-target-system)
"cross-libc" "libc"))))
(substitute* "shapely/geos.py"
(("_lgeos = load_dll\\('geos_c', fallbacks=.*\\)")
(string-append "_lgeos = load_dll('geos_c', fallbacks=['"
geos "/lib/libgeos_c.so'])"))
(("free = load_dll\\('c'\\)\\.free")
(string-append "free = load_dll('c', fallbacks=['"
glibc "/lib/libc.so.6']).free"))))
#t)))))
(home-page "https://github.com/Toblerity/Shapely")
(synopsis "Library for the manipulation and analysis of geometric objects")
(description "Shapely is a Python package for manipulation and analysis of
planar geometric objects. It is based on the @code{GEOS} library.")
(license license:bsd-3)))
(define-public python-logwrap
(package
(name "python-logwrap")
(version "3.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "logwrap" version ".zip"))
(sha256
(base32
"1d2k0hvpbi51vl410y8fbs5m0nxnlh2k7gr2nrh3k81ibhzscsra"))))
(build-system python-build-system)
(propagated-inputs
`(("python-six" ,python-six)
("python-typing" ,python-typing)))
(native-inputs
`(("unzip" ,unzip)
("python-cython" ,python-cython)
("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)
("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://github.com/penguinolog/logwrap")
(synopsis "Decorator for logging function arguments")
(description "This package provides a decorator to log function arguments
and function call return values in a human-readable way.")
(license license:asl2.0)))
(define-public python2-shapely
(package-with-python2 python-shapely))
(define-public python-clyent
(package
(name "python-clyent")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "clyent" version))
(sha256
(base32
"1r9987qmy1pz3hq54160bapqsywpq14waw4w9x3ly8hmq7kpgfbj"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)))
(home-page "https://github.com/binstar/clyent")
(synopsis "Command line client library")
(description "Clyent is a Python command line utiliy library. It is used
by @code{binstar}, @code{binstar-build} and @code{chalmers}.")
(license license:bsd-3)))
(define-public python2-clyent
(package-with-python2 python-clyent))
(define-public python-babel
(package
(name "python-babel")
(version "2.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Babel" version))
(sha256
(base32
"08rxmbx2s4irp0w0gmn498vns5xy0fagm0fg33xa772jiks51flc"))))
(build-system python-build-system)
(native-inputs
`(("python-freezegun" ,python-freezegun)
("python-pytest" ,python-pytest)))
(propagated-inputs
`(("python-pytz" ,python-pytz)))
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "pytest" "-vv"))))))
(home-page "http://babel.pocoo.org/")
(synopsis
"Tools for internationalizing Python applications")
(description
"Babel is composed of two major parts:
- tools to build and work with gettext message catalogs
- a Python interface to the CLDR (Common Locale Data Repository), providing
access to various locale display names, localized number and date formatting,
etc. ")
(license license:bsd-3)))
(define-public python2-babel
(package-with-python2 python-babel))
(define-public python2-backport-ssl-match-hostname
(package
(name "python2-backport-ssl-match-hostname")
(version "3.5.0.1")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/b/"
"backports.ssl_match_hostname/backports.ssl_match_hostname-"
version ".tar.gz"))
(sha256
(base32
"1wndipik52cyqy0677zdgp90i435pmvwd89cz98lm7ri0y3xjajh"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2
#:tests? #f)) ; no test target
(home-page "https://bitbucket.org/brandon/backports.ssl_match_hostname")
(synopsis "Backport of ssl.match_hostname() function from Python 3.5")
(description
"This backport brings the ssl.match_hostname() function to users of
earlier versions of Python. The function checks the hostname in the
certificate returned by the server to which a connection has been established,
and verifies that it matches the intended target hostname.")
(license license:psfl)))
(define-public python-hdf4
(package
(name "python-hdf4")
(version "0.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"1hjiyrxvxk9817qyqky3nar4y3fs4z8wxz0n884zzb5wi6skrjks"))))
(build-system python-build-system)
(native-inputs `(("nose" ,python-nose)))
(propagated-inputs `(("numpy" ,python-numpy)))
(inputs
`(("hdf4" ,hdf4)
("libjpeg" ,libjpeg)
("zlib" ,zlib)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; The 'runexamples' script sets PYTHONPATH to CWD, then goes
;; on to import numpy. Somehow this works on their CI system.
;; Let's just manage PYTHONPATH here instead.
(substitute* "runexamples.sh"
(("export PYTHONPATH=.*") ""))
(setenv "PYTHONPATH"
(string-append (getcwd) ":"
(getenv "PYTHONPATH")))
(invoke "./runexamples.sh")
(invoke "nosetests" "-v"))))))
(home-page "https://github.com/fhs/python-hdf4")
(synopsis "Python interface to the NCSA HDF4 library")
(description
"Python-HDF4 is a python wrapper around the NCSA HDF version 4 library,
which implements the SD (Scientific Dataset), VS (Vdata) and V (Vgroup) API’s.
NetCDF files can also be read and modified. Python-HDF4 is a fork of
@url{http://hdfeos.org/software/pyhdf.php,pyhdf}.")
(license license:expat)))
(define-public python2-hdf4
(package-with-python2 python-hdf4))
(define-public python-h5py
(package
(name "python-h5py")
(version "2.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "h5py" version))
(sha256
(base32
"0mdr6wrq02ac93m1aqx9kad0ppfzmm4imlxqgyy1x4l7hmdcc9p6"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; no test target
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-hdf5-paths
(lambda* (#:key inputs #:allow-other-keys)
(let ((prefix (assoc-ref inputs "hdf5")))
(substitute* "setup_build.py"
(("\\['/opt/local/lib', '/usr/local/lib'\\]")
(string-append "['" prefix "/lib" "']"))
(("'/opt/local/include', '/usr/local/include'")
(string-append "'" prefix "/include" "'")))
(substitute* "setup_configure.py"
(("\\['/usr/local/lib', '/opt/local/lib'\\]")
(string-append "['" prefix "/lib" "']")))
#t))))))
(propagated-inputs
`(("python-six" ,python-six)
("python-numpy" ,python-numpy)))
(inputs
`(("hdf5" ,hdf5)))
(native-inputs
`(("python-cython" ,python-cython)
("python-pkgconfig" ,python-pkgconfig)))
(home-page "http://www.h5py.org/")
(synopsis "Read and write HDF5 files from Python")
(description
"The h5py package provides both a high- and low-level interface to the
HDF5 library from Python. The low-level interface is intended to be a
complete wrapping of the HDF5 API, while the high-level component supports
access to HDF5 files, datasets and groups using established Python and NumPy
concepts.")
(license license:bsd-3)))
(define-public python2-h5py
(package-with-python2 python-h5py))
(define-public python-sh
(package
(name "python-sh")
(version "1.12.14")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sh" version))
(sha256
(base32
"1z2hx357xp3v4cv44xmqp7lli3frndqpyfmpbxf7n76h7s1zaaxm"))))
(build-system python-build-system)
(home-page "https://github.com/amoffat/sh")
(synopsis "Python subprocess replacement")
(description "This package provides a replacement for Python's
@code{subprocess} feature.")
(license license:expat)))
(define-public python-cftime
(package
(name "python-cftime")
(version "1.0.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cftime" version))
(sha256
(base32
"0362dhxbzk593walyjz30dll6y2y79wialik647cbwdsf3ad0x6x"))))
(build-system python-build-system)
(propagated-inputs
`(("python-numpy" ,python-numpy)))
(native-inputs
`(("python-coveralls" ,python-coveralls)
("python-cython" ,python-cython)
("python-pytest-cov" ,python-pytest-cov)))
(home-page "https://github.com/Unidata/cftime")
(synopsis "Library for time handling")
(description
"This package provides time-handling functionality that used to be part
of the netcdf4 package before.")
;; This package claims to include code under the GPLv3 but is released
;; under ISC.
(license (list license:isc license:gpl3+))))
(define-public python-netcdf4
(package
(name "python-netcdf4")
(version "1.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "netCDF4" version))
(sha256
(base32
"0c0sklgrmv15ygliin8qq0hp7vanmbi74m6zpi0r1ksr0hssyd5r"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'configure-locations
(lambda* (#:key inputs #:allow-other-keys)
(setenv "HDF5_DIR" (assoc-ref inputs "hdf5"))
#t)))))
(native-inputs
`(("python-cython" ,python-cython)))
(propagated-inputs
`(("python-numpy" ,python-numpy)
("python-cftime" ,python-cftime)))
(inputs
`(("netcdf" ,netcdf)
("hdf4" ,hdf4)
("hdf5" ,hdf5)))
(home-page "https://github.com/Unidata/netcdf4-python")
(synopsis "Python/numpy interface to the netCDF library")
(description "Netcdf4-python is a Python interface to the netCDF C
library. netCDF version 4 has many features not found in earlier
versions of the library and is implemented on top of HDF5. This module
can read and write files in both the new netCDF 4 and the old netCDF 3
format, and can create files that are readable by HDF5 clients. The
API is modelled after @code{Scientific.IO.NetCDF}, and should be familiar
to users of that module.")
;; The software is mainly ISC, but includes some files covered
;; by the Expat license.
(license (list license:isc license:expat))))
(define-public python2-netcdf4
(package-with-python2 python-netcdf4))
(define-public python-lockfile
(package
(name "python-lockfile")
(version "0.12.2")
(source
(origin
(method url-fetch)
(uri (string-append "https://pypi.python.org/packages/source/l/lockfile/"
"lockfile-" version ".tar.gz"))
(sha256
(base32
"16gpx5hm73ah5n1079ng0vy381hl802v606npkx4x8nb0gg05vba"))))
(build-system python-build-system)
(arguments '(#:test-target "check"))
(native-inputs
`(("python-pbr" ,python-pbr)))
(home-page "https://launchpad.net/pylockfile")
(synopsis "Platform-independent file locking module")
(description
"The lockfile package exports a LockFile class which provides a simple
API for locking files.")
(license license:expat)))
(define-public python2-lockfile
(package-with-python2 python-lockfile))
(define-public python-semantic-version
(package
(name "python-semantic-version")
(version "2.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "semantic_version" version))
(sha256
(base32
"1h2l9xyg1zzsda6kjcmfcgycbvrafwci283vcr1v5sbk01l2hhra"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; PyPI tarball lacks tests
(home-page "https://github.com/rbarrois/python-semanticversion")
(synopsis "Semantic versioning module for Python")
(description
"The @code{semantic_version} class is a small library for handling
@uref{https://semver.org/, semantic versioning} (@dfn{SemVer}) in Python.
It can compare versions, generate a new version that represents a bump in one of
the version levels, and check whether any given string is a proper semantic
version identifier.")
(license license:bsd-3)))
(define-public python2-semantic-version
(package-with-python2 python-semantic-version))
(define-public python-serpent
(package
(name "python-serpent")
(version "1.27")
(source
(origin
(method url-fetch)
(uri (pypi-uri "serpent" version))
(sha256
(base32
"04p9dsrm5pv8vhk3flvih55kgvlzpi38hlaykdiakddmgwqw93bg"))))
(build-system python-build-system)
(home-page "https://github.com/irmen/Serpent")
(synopsis "Serializer for literal Python expressions")
(description
"Serpent provides ast.literal_eval() compatible object tree
serialization. It serializes an object tree into bytes (utf-8 encoded string)
that can be decoded and then passed as-is to ast.literal_eval() to rebuild it
as the original object tree. As such it is safe to send serpent data to other
machines over the network for instance (because only safe literals are
encoded).")
(license license:expat)))
(define-public python-setuptools
(package
(name "python-setuptools")
(version "40.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools" version ".zip"))
(sha256
(base32
"0pq116lr14gnc62v76nk0npkm6krb2mpp7p9ab369zgv4n7dnah1"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove included binaries which are used to build self-extracting
;; installers for Windows.
;; TODO: Find some way to build them ourself so we can include them.
(for-each delete-file (find-files "setuptools" "^(cli|gui).*\\.exe$"))
#t))))
(build-system python-build-system)
;; FIXME: Tests require pytest, which itself relies on setuptools.
;; One could bootstrap with an internal untested setuptools.
(arguments
`(#:tests? #f))
(home-page "https://pypi.python.org/pypi/setuptools")
(synopsis
"Library designed to facilitate packaging Python projects")
(description
"Setuptools is a fully-featured, stable library designed to facilitate
packaging Python projects, where packaging includes:
Python package and module definitions,
distribution package metadata,
test hooks,
project installation,
platform-specific details,
Python 3 support.")
;; TODO: setuptools now bundles the following libraries:
;; packaging, pyparsing, six and appdirs. How to unbundle?
(license (list license:psfl ; setuptools itself
license:expat ; six, appdirs, pyparsing
license:asl2.0 ; packaging is dual ASL2/BSD-2
license:bsd-2))))
(define-public python2-setuptools
(package-with-python2 python-setuptools))
(define-public python-uniseg
(package
(name "python-uniseg")
(version "0.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "uniseg" version ".zip"))
(sha256
(base32
"05jsazvz6nbmh6l3v1rph5ydkqn1hzx1pyggdyvgp2qgmgrnmiz2"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; The test suite requires network access.
(native-inputs
`(("unzip" ,unzip)))
(home-page
"https://bitbucket.org/emptypage/uniseg-python")
(synopsis
"Python library to determine Unicode text segmentations")
(description
"Uniseg is a Python package used to determine Unicode text segmentations.
Supported segmentations include:
@enumerate
@item @dfn{Code point} (any value in the Unicode codespace)
@item @dfn{Grapheme cluster} (user-perceived character made of a single or
multiple Unicode code points, e.g. \"G\" + acute-accent)
@item Word break
@item Sentence break
@item Line break
@end enumerate")
(license license:expat)))
(define-public python2-uniseg
(package-with-python2 python-uniseg))
(define-public python-humanfriendly
(package
(name "python-humanfriendly")
(version "4.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "humanfriendly" version))
(sha256
(base32
"0pisgizjql86785jchfjv217g0lsgk114g2lja5j4y3lsc3b9szi"))))
(build-system python-build-system)
(arguments
`(;; XXX: Tests depend on coloredlogs, which in turn depends on humanfriendly.
#:tests? #f))
(propagated-inputs
`(("python-monotonic" ,python-monotonic)))
(home-page "https://humanfriendly.readthedocs.io")
(synopsis "Human-friendly input and output in Python")
(description
"The functions and classes in @code{humanfriendly} can be used to make
text interfaces more user-friendly. It includes tools to parse and format
numbers, file sizes, and timespans, timers for long-running operations, menus
to allow the user to choose from a list of options, and terminal interaction
helpers.")
(license license:expat)))
(define-public python2-humanfriendly
(package-with-python2 python-humanfriendly))
(define-public python-capturer
(package
(name "python-capturer")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "capturer" version))
(sha256
(base32
"05d6ji4j8ipiq0br7bwam38qc6hd9l1djmfxlzrxx19ziyjl4089"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(propagated-inputs
`(("python-humanfriendly" ,python-humanfriendly)))
(home-page "https://capturer.readthedocs.io")
(synopsis "Capture stdout and stderr streams of the current process")
(description
"The capturer package makes it easy to capture the stdout and stderr
streams of the current process and subprocesses. Output can be relayed
to the terminal in real time but is also available to the Python program
for additional processing.")
(license license:expat)))
(define-public python2-capturer
(package-with-python2 python-capturer))
(define-public python-case
(package
(name "python-case")
(version "1.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "case" version))
(sha256
(base32
"1cagg06vfph864s6l5jb0zqliwxh647bki8j6lf4a4qrv40jnhs8"))))
(build-system python-build-system)
(propagated-inputs
`(("python-mock" ,python-mock)
("python-nose" ,python-nose)
("python-six" ,python-six)
("python-unittest2" ,python-unittest2)))
(native-inputs
`(("python-coverage" ,python-coverage)))
(home-page "https://github.com/celery/case")
(synopsis "Unittest utilities and convenience methods")
(description
"The @code{case} package provides utilities on top of unittest, including
some helpful Python 2 compatibility convenience methods.")
(license license:bsd-3)))
(define-public python-verboselogs
(package
(name "python-verboselogs")
(version "1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "verboselogs" version))
(sha256
(base32
"09z4d1jiasn7k1hs5af2ckmnrd0i1d1m04bhfjhv7z6svzfdwgg3"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)
("python-astroid" ,python-astroid)
("python-pylint" ,python-pylint)))
(home-page "https://verboselogs.readthedocs.io")
(synopsis "Verbose logging level for Python's logging module")
(description
"The @code{verboselogs} package extends Python's @code{logging} module to
add the log levels NOTICE, SPAM, SUCCESS and VERBOSE.")
(license license:expat)))
(define-public python2-verboselogs
(package-with-python2 python-verboselogs))
(define-public python-coloredlogs
(package
(name "python-coloredlogs")
(version "7.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "coloredlogs" version))
(sha256
(base32
"1blcann6dyg5dhps9pg12rn0q0rjrlajpmmil0gy0j4cbvnl2il9"))))
(build-system python-build-system)
(arguments
`(;Tests require some updated modules
#:tests? #f))
(propagated-inputs
`(("python-capturer" ,python-capturer)))
(home-page "https://coloredlogs.readthedocs.io")
(synopsis "Colored stream handler for Python's logging module")
(description
"The @code{coloredlogs} package enables colored terminal output for
Python's logging module. The @code{ColoredFormatter} class inherits from
@code{logging.Formatter} and uses ANSI escape sequences to render your logging
messages in color.")
(license license:expat)))
(define-public python2-coloredlogs
(package-with-python2 python-coloredlogs))
(define-public python-eventlet
(package
(name "python-eventlet")
(version "0.20.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "eventlet" version))
(sha256
(base32
"0f3q55mq4n021wb7qa53pz3ix6i2py64sap66vsaqm2scjw83m9s"))))
(build-system python-build-system)
(propagated-inputs
`(("python-greenlet" ,python-greenlet)))
(arguments
;; TODO: Requires unpackaged 'enum-compat'.
'(#:tests? #f))
(home-page "http://eventlet.net")
(synopsis "Concurrent networking library for Python")
(description
"Eventlet is a concurrent networking library for Python that
allows you to change how you run your code, not how you write it.
It uses @code{epoll} or @code{libevent} for highly scalable non-blocking I/O.
Coroutines ensure that the developer uses a blocking style of programming
that is similar to threading, but provide the benefits of non-blocking I/O.
The event dispatch is implicit, which means you can easily use @code{Eventlet}
from the Python interpreter, or as a small part of a larger application.")
(license license:expat)))
(define-public python2-eventlet
(let ((base (package-with-python2
(strip-python2-variant python-eventlet))))
(package (inherit base)
(propagated-inputs
`(("python2-enum34" ,python2-enum34)
,@(package-propagated-inputs base))))))
(define-public python-six
(package
(name "python-six")
(version "1.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "six" version))
(sha256
(base32
"1scqzwc51c875z23phj48gircqjgnn3af8zy2izjwmnlxrxsgs3h"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "py.test" "-v"))))))
(native-inputs
`(("python-py" ,python-py)
("python-pytest" ,python-pytest-bootstrap)))
(home-page "https://pypi.python.org/pypi/six/")
(synopsis "Python 2 and 3 compatibility utilities")
(description
"Six is a Python 2 and 3 compatibility library. It provides utility
functions for smoothing over the differences between the Python versions with
the goal of writing Python code that is compatible on both Python versions.
Six supports every Python version since 2.5. It is contained in only one
Python file, so it can be easily copied into your project.")
(license license:x11)))
(define-public python2-six
(package-with-python2 python-six))
(define-public python-six-bootstrap
(package
(inherit python-six)
(name "python-six-bootstrap")
(native-inputs `())
(arguments `(#:tests? #f))))
(define-public python2-six-bootstrap
(package-with-python2 python-six-bootstrap))
(define-public python-schedule
(package
(name "python-schedule")
(version "0.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schedule" version))
(sha256
(base32
"0vplyjcbfrq50sphlwya749z8p2pcyi2nycw3518i0qpd9a6189i"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
("python-mock" ,python-mock)))
(home-page "https://github.com/dbader/schedule")
(synopsis "Schedule periodic function calls in Python")
(description
"Schedule is an in-process scheduler for periodic jobs that uses the
builder pattern for configuration. Schedule lets you run Python functions (or
any other callable) periodically at pre-determined intervals using a simple,
human-friendly syntax.")
(license license:expat)))
(define-public python2-schedule
(package-with-python2 python-schedule))
(define-public python-pandas
(package
(name "python-pandas")
(version "0.23.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pandas" version))
(sha256
(base32 "1x54pd7hr3y7qahx6b5bf2wzj54xvl8r3s1h4pl254pnmi3wl92v"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-26))
#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(let ((build-directory
(string-append
(getcwd) "/build/"
(car (scandir "build"
(cut string-prefix? "lib." <>))))))
;; Disable the "strict data files" option which causes
;; the build to error out if required data files are not
;; available (as is the case with PyPI archives).
(substitute* "setup.cfg"
(("addopts = --strict-data-files") "addopts = "))
(with-directory-excursion build-directory
;; Delete tests that require "moto" which is not yet in Guix.
(for-each delete-file
'("pandas/tests/io/conftest.py"
"pandas/tests/io/json/test_compression.py"
"pandas/tests/io/parser/test_network.py"
"pandas/tests/io/test_excel.py"
"pandas/tests/io/test_parquet.py"))
(invoke "pytest" "-vv" "pandas" "--skip-slow"
"--skip-network" "-k"
;; XXX: Due to the deleted tests above.
"not test_read_s3_jsonl"))))))))
(propagated-inputs
`(("python-numpy" ,python-numpy)
("python-pytz" ,python-pytz)
("python-dateutil" ,python-dateutil)))
(native-inputs
`(("python-cython" ,python-cython)
("python-beautifulsoup4" ,python-beautifulsoup4)
("python-lxml" ,python-lxml)
("python-html5lib" ,python-html5lib)
("python-nose" ,python-nose)
("python-pytest" ,python-pytest)))
(home-page "https://pandas.pydata.org")
(synopsis "Data structures for data analysis, time series, and statistics")
(description
"Pandas is a Python package providing fast, flexible, and expressive data
structures designed to make working with structured (tabular,
multidimensional, potentially heterogeneous) and time series data both easy
and intuitive. It aims to be the fundamental high-level building block for
doing practical, real world data analysis in Python.")
(license license:bsd-3)))
(define-public python2-pandas
(package-with-python2 python-pandas))
(define-public python2-mechanize
(package
(name "python2-mechanize")
(version "0.2.5")
(source
(origin
(method url-fetch)
(uri (string-append "https://pypi.python.org/packages/source/m/mechanize/mechanize-"
version ".tar.gz"))
(sha256
(base32
"0rj7r166i1dyrq0ihm5rijfmvhs8a04im28lv05c0c3v206v4rrf"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2 ; apparently incompatible with Python 3
#:tests? #f))
;; test fails with message
;; AttributeError: 'module' object has no attribute 'test_pullparser'
;; (python-3.3.2) or
;; AttributeError: 'module' object has no attribute 'test_urllib2_localnet'
;; (python-2.7.5).
;; The source code is from March 2011 and probably not up-to-date
;; with respect to python unit tests.
(home-page "http://wwwsearch.sourceforge.net/mechanize/")
(synopsis
"Stateful programmatic web browsing in Python")
(description
"Mechanize implements stateful programmatic web browsing in Python,
after Andy Lester’s Perl module WWW::Mechanize.")
(license (license:non-copyleft
"file://COPYING"
"See COPYING in the distribution."))))
(define-public python-simplejson
(package
(name "python-simplejson")
(version "3.14.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simplejson" version))
(sha256
(base32
"1lkv3xlf7ryzi69zqfdbkvpxdfy1rg1rq2yzcnxgf4km5m6difqy"))))
(build-system python-build-system)
(home-page "http://simplejson.readthedocs.org/en/latest/")
(synopsis
"Json library for Python")
(description
"JSON (JavaScript Object Notation) is a subset of JavaScript
syntax (ECMA-262 3rd edition) used as a lightweight data interchange
format.
Simplejson exposes an API familiar to users of the standard library marshal
and pickle modules. It is the externally maintained version of the json
library contained in Python 2.6, but maintains compatibility with Python 2.5
and (currently) has significant performance advantages, even without using
the optional C extension for speedups. Simplejson is also supported on
Python 3.3+.")
(license license:x11)))
(define-public python2-simplejson
(package-with-python2 python-simplejson))
(define-public python-pyicu
(package
(name "python-pyicu")
(version "2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyICU" version))
(sha256
(base32
"0wq9y5fi1ighgf5aws9nr87vi1w44p7q1k83rx2y3qj5d2xyhspa"))))
(build-system python-build-system)
(inputs
`(("icu4c" ,icu4c)))
(native-inputs
`(("python-pytest" ,python-pytest)
("python-six" ,python-six)))
(home-page "https://github.com/ovalhub/pyicu")
(synopsis "Python extension wrapping the ICU C++ API")
(description
"PyICU is a python extension wrapping the ICU C++ API.")
(properties `((python2-variant . ,(delay python2-pyicu))))
(license license:x11)))
(define-public python2-pyicu
(let ((base (package-with-python2
(strip-python2-variant python-pyicu))))
(package
(inherit base)
(arguments
`(,@(package-arguments base)
#:phases
(modify-phases %standard-phases
(add-before 'check 'delete-failing-test
(λ _
;; XXX: This fails due to Unicode issues unique to Python 2,
;; it seems: <https://github.com/ovalhub/pyicu/issues/61>.
(delete-file "test/test_Script.py")
#t))))))))
(define-public python2-dogtail
;; Python 2 only, as it leads to "TabError: inconsistent use of tabs and
;; spaces in indentation" with Python 3.
(package
(name "python2-dogtail")
(version "0.9.9")
(source (origin
(method url-fetch)
(uri (pypi-uri "dogtail" version))
(sha256
(base32
"0p5wfssvzr9w0bvhllzbbd8fnp4cca2qxcpcsc33dchrmh5n552x"))))
(build-system python-build-system)
(arguments `(#:python ,python-2
#:tests? #f)) ; invalid command "test"
;; Currently no offical homepage.
(home-page "https://pypi.python.org/pypi/dogtail/")
(synopsis "GUI test tool and automation framework written in Python")
(description
"Dogtail is a GUI test tool and automation framework written in Python.
It uses Accessibility (a11y) technologies to communicate with desktop
applications. dogtail scripts are written in Python and executed like any
other Python program.")
(license license:gpl2+)))
(define-public python-empy
(package
(name "python-empy")
(version "3.3")
(source (origin
(method url-fetch)
(uri (string-append "http://www.alcyone.com/software/empy/empy-"
version ".tar.gz"))
(sha256
(base32
"01g8mmkfnvjdmlhsihwyx56lrg7r5m5d2fg6mnxsvy6g0dnl69f6"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;python2 only
(home-page "http://www.alcyone.com/software/empy/")
(synopsis "Templating system for Python")
(description
"EmPy is a system for embedding Python expressions and statements in
template text; it takes an EmPy source file, processes it, and produces
output. This is accomplished via expansions, which are special signals to the
EmPy system and are set off by a special prefix (by default the at sign, @@).
EmPy can expand arbitrary Python expressions and statements in this way, as
well as a variety of special forms. Textual data not explicitly delimited in
this way is sent unaffected to the output, allowing Python to be used in
effect as a markup language. Also supported are callbacks via hooks,
recording and playback via diversions, and dynamic, chainable filters. The
system is highly configurable via command line options and embedded
commands.")
(license license:lgpl2.1+)))
(define-public python2-empy
(package-with-python2 python-empy))
(define-public python2-element-tree
(package
(name "python2-element-tree")
(version "1.2.6")
(source (origin
(method url-fetch)
(uri (string-append
"http://effbot.org/media/downloads/elementtree-"
version "-20050316.tar.gz"))
(sha256
(base32
"016bphqnlg0l4vslahhw4r0aanw95bpypy65r1i1acyb2wj5z7dj"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2 ; seems to be part of Python 3
#:tests? #f)) ; no 'test' sub-command
(synopsis "Toolkit for XML processing in Python")
(description
"ElementTree is a Python library supporting lightweight XML processing.")
(home-page "http://effbot.org/zone/element-index.htm")
(license (license:x11-style
"http://docs.python.org/2/license.html"
"Like \"CWI LICENSE AGREEMENT FOR PYTHON 0.9.0 THROUGH 1.2\"."))))
(define-public python2-pybugz
(package
(name "python2-pybugz")
(version "0.6.11")
(source (origin
(method url-fetch)
(uri (string-append
"http://bits.liquidx.net/projects/pybugz/pybugz-"
version ".tar.gz"))
(sha256
(base32
"17ni00p08gp5lkxlrrcnvi3x09fmajnlbz4da03qcgl9q21ym4jd"))
(patches (search-patches "pybugz-stty.patch"
"pybugz-encode-error.patch"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2 ; SyntaxError with Python 3
#:tests? #f)) ; no 'test' sub-command
(propagated-inputs
`(("element-tree" ,python2-element-tree)))
(synopsis "Python and command-line interface to Bugzilla")
(description
"PyBugz is a Python library and command-line tool to query the Bugzilla
bug tracking system. It is meant as an aid to speed up interaction with the
bug tracker.")
(home-page "http://www.liquidx.net/pybugz/")
(license license:gpl2)))
(define-public python2-enum
(package
(name "python2-enum")
(version "0.4.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "enum" version))
(sha256
(base32
"13lk3yrwj42vl30kw3c194f739nrfrdg64s6i0v2p636n4k8brsl"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2))
(home-page "http://pypi.python.org/pypi/enum/")
(synopsis "Robust enumerated type support in Python")
(description
"This provides a module for robust enumerations in Python. It has
been superseded by the Python standard library and is provided only for
compatibility.")
;; Choice of either license.
(license (list license:gpl3+ license:psfl))))
(define-public python-enum34
(package
(name "python-enum34")
(version "1.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "enum34" version))
(sha256
(base32
"1cgm5ng2gcfrkrm3hc22brl6chdmv67b9zvva9sfs7gn7dwc9n4a"))))
(build-system python-build-system)
(home-page "https://pypi.python.org/pypi/enum34")
(synopsis "Backported Python 3.4 Enum")
(description
"Enum34 is the new Python stdlib enum module available in Python 3.4
backported for previous versions of Python from 2.4 to 3.3.")
(license license:bsd-3)))
(define-public python2-enum34
(package-with-python2 python-enum34))
(define-public python-parse-type
(package
(name "python-parse-type")
(version "0.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parse_type" version))
(sha256
(base32
"0g3b6gsdwnm8dpkh2vn34q6dzxm9gl908ggyzcv31n9xbp3vv5pm"))))
(build-system python-build-system)
(propagated-inputs
`(("python-six" ,python-six)
("python-parse" ,python-parse)))
(native-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://github.com/jenisys/parse_type")
(synopsis "Extended parse module")
(description
"Parse_type extends the python parse module.")
(properties
`((python2-variant . ,(delay python2-parse-type))))
(license license:bsd-3)))
(define-public python2-parse-type
(let ((base (package-with-python2
(strip-python2-variant python-parse-type))))
(package (inherit base)
(propagated-inputs
`(("python2-enum34" ,python2-enum34)
,@(package-propagated-inputs base))))))
(define-public python-parse
(package
(name "python-parse")
(version "1.8.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parse" version))
(sha256
(base32
"0f8997xr8nq2nq35iiviq8ningd1zvy59fg503xfpbi2dwhgdkf3"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "python" "test_parse.py"))))))
(home-page "https://github.com/r1chardj0n3s/parse")
(synopsis "Parse strings")
(description
"Parse strings using a specification based on the Python @code{format()}
syntax.")
(license license:x11)))
(define-public python-polib
(package
(name "python-polib")
(version "1.0.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "polib" version))
(sha256
(base32
"1pq2hbm3m2q0cjdszk8mc4qa1vl3wcblh5nfyirlfnzb2pcy7zss"))))
(build-system python-build-system)
(home-page "https://bitbucket.org/izi/polib/wiki/Home")
(synopsis "Manipulate, create and modify gettext files")
(description "Polib can manipulate any gettext format (po, pot and mo)
files. It can be used to create po files from scratch or to modify
existing ones.")
(license license:expat)))
(define-public python2-polib
(let ((base (package-with-python2 (strip-python2-variant python-polib))))
(package
(inherit base)
(arguments `(,@(package-arguments base)
;; Tests don't work with python2.
#:tests? #f)))))
(define-public scons
(package
(name "scons")
(version "3.0.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/scons/scons/" version
"/scons-" version ".tar.gz"))
(sha256
(base32
"0wzid419mlwqw9llrg8gsx4nkzhqy16m4m40r0xnh6cwscw5wir4"))))
(build-system python-build-system)
(arguments
`(#:use-setuptools? #f ; still relies on distutils
#:tests? #f)) ; no 'python setup.py test' command
(home-page "http://scons.org/")
(synopsis "Software construction tool written in Python")
(description
"SCons is a software construction tool. Think of SCons as an improved,
cross-platform substitute for the classic Make utility with integrated
functionality similar to autoconf/automake and compiler caches such as ccache.
In short, SCons is an easier, more reliable and faster way to build
software.")
(license license:x11)))
(define-public scons-python2
(package
(inherit (package-with-python2 scons))
(name "scons-python2")))
(define-public python-extras
(package
(name "python-extras")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "extras" version))
(sha256
(base32
"0khvm08rcwm62wc47j8niyl6h13f8w51c8669ifivjdr23g3cbhk"))))
(build-system python-build-system)
(arguments
;; FIXME: Circular dependency on testtools.
'(#:tests? #f))
(home-page "https://github.com/testing-cabal/extras")
(synopsis "Useful extensions to the Python standard library")
(description
"Extras is a set of extensions to the Python standard library.")
(license license:expat)))
(define-public python2-extras
(package-with-python2 python-extras))
(define-public python-mimeparse
(package
(name "python-mimeparse")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/p/python-mimeparse/python-mimeparse-"
version ".tar.gz"))
(sha256
(base32
"0y2g6cl660bpz11srgqyvvm8gmywpgyx8g0xfvbiyr0af0yv1r3n"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "./mimeparse_test.py"))))))
(home-page
"https://github.com/dbtsai/python-mimeparse")
(synopsis "Python library for parsing MIME types")
(description
"Mimeparse provides basic functions for parsing MIME type names and
matching them against a list of media-ranges.")
(license license:expat)))
(define-public python2-mimeparse
(package-with-python2 python-mimeparse))
(define-public python-miniboa
(package
(name "python-miniboa")
(version "1.0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "miniboa" version))
(sha256
(base32
"09jh3pn4rh7kh7jayanf8jzy6gp03791b5a193w6148cf3i6k9m3"))))
(build-system python-build-system)
(home-page "https://github.com/shmup/miniboa")
(synopsis "Simple, single-threaded Telnet server")
(description
"Miniboa is a simple, asynchronous, single-threaded, poll-based Telnet
server.")
(license license:asl2.0)))
(define-public python2-miniboa
(package-with-python2 python-miniboa))
(define-public python-pafy
(package
(name "python-pafy")
(version "0.5.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pafy" version))
(sha256
(base32
"1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Currently pafy can not find itself in the tests
(propagated-inputs
;; Youtube-dl is a python package which is imported in the file
;; "backend_youtube_dl.py", therefore it needs to be propagated.
`(("youtube-dl" ,youtube-dl)))
(home-page "https://np1.github.io/pafy/")
(synopsis "Retrieve YouTube content and metadata")
(description
"@code{pafy} is a python library to retrieve YouTube content and metadata.")
(license license:lgpl3+)))
(define-public python2-funcsigs
(package
(name "python2-funcsigs")
(version "1.0.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "funcsigs" version))
(sha256
(base32
"0l4g5818ffyfmfs1a924811azhjj8ax9xd1cffr1mzd3ycn0zfx7"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2))
(native-inputs
`(("python2-unittest2" ,python2-unittest2)))
(home-page "http://funcsigs.readthedocs.org")
(synopsis "Python function signatures from PEP362")
(description
"Backport of @code{funcsigs} which was introduced in Python 3.3.")
(license license:asl2.0)))
(define-public python2-funcsigs-bootstrap
(package
(inherit python2-funcsigs)
(name "python2-funcsigs-bootstrap")
(native-inputs `())
(arguments
`(#:tests? #f
,@(package-arguments python2-funcsigs)))))
(define-public python-py
(package
(name "python-py")
(version "1.5.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py" version))
(sha256
(base32
"1xxvwfn82457djf55f5n2c94699rfqnk43br8fif2r2q8gvrmm9z"))))
(build-system python-build-system)
(arguments
;; FIXME: "ImportError: 'test' module incorrectly imported from
;; '/gnu/store/...-python-pytest-mimimal-3.0.5/lib/python3.5/site-packages'.
;; Expected '/tmp/guix-build-python-py-1.4.31.drv-0/py-1.4.31/py'.
;; Is this module globally installed?"
'(#:tests? #f))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)))
(home-page "https://github.com/pytest-dev/py")
(synopsis "Python library for parsing, I/O, instrospection, and logging")
(description
"Py is a Python library for file name parsing, .ini file parsing, I/O,
code introspection, and logging.")
(license license:expat)))
(define-public python2-py
(package-with-python2 python-py))
;; Recent versions of python-fixtures and python-testrepository need
;; python-pbr for packaging, which itself needs these two packages for
;; testing.
;; To fix this circular dependency, we use a build of python-pbr, based on the
;; same source, just without any test dependencies and with tests disabled.
;; python-pbr-minmal is then used to package python-fixtures and
;; python-testrepository.
;; Strictly speaking we currently could remove the test-requirements from the
;; normal python-pbr package (and save this package) since test are disabled
;; there anyway. But this may change in future.
(define-public python-pbr-minimal
(package
(name "python-pbr-minimal")
(version "3.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pbr" version))
(sha256
(base32
"14fs5acnalnb3h62s7q7av239j541fk0n0z0lawh4h09b1s93s6p"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(home-page "http://docs.openstack.org/developer/pbr/")
(synopsis "Minimal build of python-pbr used for bootstrapping")
(description
"Used only for bootstrapping python2-pbr, you should not need this.")
(license license:asl2.0)))
(define-public python2-pbr-minimal
(package-with-python2 python-pbr-minimal))
(define-public python-pbr
(package
(inherit python-pbr-minimal)
(name "python-pbr")
(arguments
`(#:tests? #f)) ;; Most tests seem to use the Internet.
(propagated-inputs
`(("git" ,git))) ;; pbr actually uses the "git" binary.
(native-inputs
`(("python-fixtures" ,python-fixtures-bootstrap)
;; discover, coverage, hacking, subunit
("python-mock" ,python-mock)
("python-six" ,python-six)
("python-sphinx" ,python-sphinx)
("python-testrepository" ,python-testrepository-bootstrap)
("python-testresources" ,python-testresources-bootstrap)
("python-testscenarios" ,python-testscenarios-bootstrap)
("python-testtools" ,python-testtools-bootstrap)
("python-virtualenv" ,python-virtualenv)))
(synopsis "Enhance the default behavior of Python’s setuptools")
(description
"Python Build Reasonableness (PBR) is a library that injects some useful
and sensible default behaviors into your setuptools run. It will set
versions, process requirements files and generate AUTHORS and ChangeLog file
from git information.
")))
(define-public python2-pbr
(package-with-python2 python-pbr))
(define-public python-exif-read
(package
(name "python-exif-read")
(version "2.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "ExifRead" version))
(sha256
(base32
"1b90jf6m9vxh9nanhpyvqdq7hmfx5iggw1l8kq10jrs6xgr49qkr"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; no tests
(home-page "https://github.com/ianare/exif-py")
(synopsis "Python library to extract EXIF data from image files")
(description
"ExifRead is a Python library to extract EXIF data from tiff and jpeg
files.")
(license license:bsd-3)))
(define-public python2-exif-read
(package-with-python2 python-exif-read))
(define-public python-pyld
(package
(name "python-pyld")
(version "1.0.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "PyLD" version))
(sha256
(base32
"12i2g6xdj30k7xxcibg3sc5y76snwq8l6n8fy9lyi577kgy0h2pm"))))
(build-system python-build-system)
(home-page "https://github.com/digitalbazaar/pyld")
(synopsis "Python implementation of the JSON-LD specification")
(description
"PyLD is an implementation of the JSON-LD specification.")
(license license:bsd-3)))
(define-public python2-pyld
(package-with-python2 python-pyld))
(define-public python-click
(package
(name "python-click")
(version "6.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "click" version))
(sha256
(base32
"02qkfpykbq35id8glfgwc38yc430427yd05z1wc5cnld8zgicmgi"))))
(build-system python-build-system)
(arguments
`(;; The tests are fragile, depending on a specific version of pytest:
;; <https://github.com/pallets/click/issues/823>
#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-paths
(lambda* (#:key inputs #:allow-other-keys)
(let ((glibc (assoc-ref inputs ,(if (%current-target-system)
"cross-libc" "libc"))))
(substitute* "click/_unicodefun.py"
(("'locale'")
(string-append "'" glibc "/bin/locale'"))))
#t)))))
(native-inputs
`(("python-pytest" ,python-pytest)))
(home-page "http://click.pocoo.org")
(synopsis "Command line library for Python")
(description
"Click is a Python package for creating command line interfaces in a
composable way with as little code as necessary. Its name stands for
\"Command Line Interface Creation Kit\". It's highly configurable but comes
with sensible defaults out of the box.")
(license license:bsd-3)))
(define-public python2-click
(package-with-python2 python-click))
(define-public python-wheel
(package
(name "python-wheel")
(version "0.30.0a0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "wheel" version))
(sha256
(base32
"1nm6mn8isny0hr86rhbfrpfj867c0phf001xgsd69xfp9ady1wwq"))))
(build-system python-build-system)
(native-inputs
`(("python-jsonschema" ,python-jsonschema)
("python-pytest-cov" ,python-pytest-cov)))
(home-page "https://bitbucket.org/pypa/wheel/")
(synopsis "Format for built Python packages")
(description
"A wheel is a ZIP-format archive with a specially formatted filename and
the @code{.whl} extension. It is designed to contain all the files for a PEP
376 compatible install in a way that is very close to the on-disk format. Many
packages will be properly installed with only the @code{Unpack} step and the
unpacked archive preserves enough information to @code{Spread} (copy data and
scripts to their final locations) at any later time. Wheel files can be
installed with a newer @code{pip} or with wheel's own command line utility.")
(license license:expat)
(properties `((python2-variant . ,(delay python2-wheel))))))
(define-public python2-wheel
(let ((wheel (package-with-python2
(strip-python2-variant python-wheel))))
(package (inherit wheel)
(native-inputs `(("python2-functools32" ,python2-functools32)
,@(package-native-inputs wheel))))))
(define-public python-vcversioner
(package
(name "python-vcversioner")
(version "2.16.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "vcversioner" version))
(sha256
(base32
"16z10sm78jd7ca3jbkgc3q5i8a8q7y1h21q1li21yy3rlhbhrrns"))))
(build-system python-build-system)
(synopsis "Python library for version number discovery")
(description "Vcversioner is a Python library that inspects tagging
information in a variety of version control systems in order to discover
version numbers.")
(home-page "https://github.com/habnabit/vcversioner")
(license license:isc)))
(define-public python2-vcversioner
(package-with-python2 python-vcversioner))
(define-public python-jsonschema
(package
(name "python-jsonschema")
(version "2.6.0")
(source (origin
(method url-fetch)
(uri
(string-append
"https://pypi.python.org/packages/source/j/jsonschema/jsonschema-"
version ".tar.gz"))
(sha256
(base32
"00kf3zmpp9ya4sydffpifn0j0mzm342a2vzh82p6r0vh10cg7xbg"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check (lambda _ (invoke "nosetests"))))))
(native-inputs
`(("python-nose" ,python-nose)
("python-vcversioner" ,python-vcversioner)))
(home-page "https://github.com/Julian/jsonschema")
(synopsis "Implementation of JSON Schema for Python")
(description
"Jsonschema is an implementation of JSON Schema for Python.")
(license license:expat)
(properties `((python2-variant . ,(delay python2-jsonschema))))))
(define-public python2-jsonschema
(let ((jsonschema (package-with-python2
(strip-python2-variant python-jsonschema))))
(package (inherit jsonschema)
(native-inputs
`(("python2-mock" ,python2-mock)
,@(package-native-inputs jsonschema)))
(propagated-inputs
`(("python2-functools32" ,python2-functools32))))))
(define-public python-schema
(package
(name "python-schema")
(version "0.6.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schema" version))
(sha256
(base32
"1lw28j9w9vxyigg7vkfkvi6ic9lgjkdnfvnxdr7pklslqvzmk2vm"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)))
(home-page "https://github.com/keleshev/schema")
(synopsis "Simple data validation library")
(description
"@code{python-schema} is a library for validating Python data
structures, such as those obtained from config-files, forms, external
services or command-line parsing, converted from JSON/YAML (or
something else) to Python data-types.")
(license license:psfl)))
(define-public python2-schema
(package-with-python2 python-schema))
(define-public python-schema-0.5
(package (inherit python-schema)
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schema" version))
(sha256
(base32
"10zqvpaky51kgb8nd42bk7jwl8cn2zvayxjpdc1wwmpybj92x67s"))))))
(define-public python2-schema-0.5
(package-with-python2 python-schema-0.5))
(define-public python-kitchen
(package
(name "python-kitchen")
(version "1.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kitchen" version))
(sha256
(base32
"1zakh6l0yjvwic9p0nkvmbidpnkygkxbigh2skmb5gccyrhbp7xg"))))
(build-system python-build-system)
(propagated-inputs
`(("python-chardet" ,python-chardet)))
(home-page "https://github.com/fedora-infra/kitchen")
(synopsis "Python API for snippets")
(description "@code{kitchen} module provides a python API for all sorts of
little useful snippets of code that everybody ends up writing for their projects
but never seem big enough to build an independent release. Use kitchen and stop
cutting and pasting that code over and over.")
(license (list license:lgpl2.1+
;; subprocess.py, test_subprocess.py,
;; kitchen/pycompat25/defaultdict.py:
license:psfl))))
(define-public python2-kitchen
(package-with-python2 python-kitchen))
(define-public python-unidecode
(package
(name "python-unidecode")
(version "1.0.23")
(source (origin
(method url-fetch)
(uri (pypi-uri "Unidecode" version))
(sha256
(base32
"1ysjbr3nqfqj97h8zyj3v9pya413vkv7a1mzml80w37xx15kb1cb"))))
(build-system python-build-system)
(home-page "https://pypi.python.org/pypi/Unidecode")
(synopsis "ASCII transliterations of Unicode text")
(description
"Unidecode provides ASCII transliterations of Unicode text. Unidecode is
useful when integrating with legacy code that doesn't support Unicode, or for
ease of entry of non-Roman names on a US keyboard, or when constructing ASCII
machine identifiers from human-readable Unicode strings that should still be
somewhat intelligible.")
(license license:gpl2+)))
(define-public python2-unidecode
(package-with-python2 python-unidecode))
(define-public python-pyjwt
(package
(name "python-pyjwt")
(version "1.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyJWT" version))
(sha256
(base32
"1rxsg14i33vm2i6lz0my628108c81k43v10n4h3p0gx62xdyf2sh"))
(modules '((guix build utils)))
(snippet
'(begin
(for-each delete-file-recursively
(find-files "." "\\.pyc$"))
#t))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)
("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://github.com/progrium/pyjwt")
(synopsis "JSON Web Token implementation in Python")
(description
"PyJWT is a JSON Web Token implementation written in Python.")
(license license:expat)))
(define-public python2-pyjwt
(package-with-python2 python-pyjwt))
(define-public python-pykka
(package
(name "python-pykka")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pykka" version))
(sha256
(base32
"049w3r0mdnnw7xv19jiq7rvls9k7xs73x05b4qs5d6z4vvmgyiz8"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)
("python-nose" ,python-nose)
("python-gevent" ,python-gevent)
("python-eventlet" ,python-eventlet)))
(home-page "https://www.pykka.org/")
(synopsis "Pykka is a Python implementation of the actor model")
(description
"Pykka is a Python implementation of the actor model.
The actor model introduces some simple rules to control the sharing
of state and cooperation between execution units, which makes it
easier to build concurrent applications.")
(license license:asl2.0)))
(define-public python2-pykka
(package-with-python2 python-pykka))
(define-public python-pympler
(package
(name "python-pympler")
(home-page "https://pythonhosted.org/Pympler/")
(version "0.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "Pympler" version))
(sha256
(base32
"03qwsbilqgvnbl3a1jmpgixbr2kq6m3fvdlzyr3wdp01bwlc85kx"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(delete 'check)
(add-after 'install 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "python" "setup.py" "test"))))))
(synopsis "Measure, monitor and analyze memory behavior")
(description
"Pympler is a development tool to measure, monitor and analyze
the memory behavior of Python objects in a running Python application.
By pympling a Python application, detailed insight in the size and the
lifetime of Python objects can be obtained. Undesirable or unexpected
runtime behavior like memory bloat and other @samp{pymples} can easily
be identified.
A web profiling frontend exposes process statistics, garbage
visualisation and class tracker statistics.")
(license license:asl2.0)))
(define-public python2-pympler
(package-with-python2 python-pympler))
(define-public python-itsdangerous
(package
(name "python-itsdangerous")
(version "0.24")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/i/itsdangerous/itsdangerous-"
version ".tar.gz"))
(sha256
(base32
"06856q6x675ly542ig0plbqcyab6ksfzijlyf1hzhgg3sgwgrcyb"))))
(build-system python-build-system)
(home-page "https://github.com/mitsuhiko/itsdangerous")
(synopsis "Python library for passing data to/from untrusted environments")
(description
"Itsdangerous provides various helpers to pass trusted data to untrusted
environments and back.")
(license license:bsd-3)))
(define-public python2-itsdangerous
(package-with-python2 python-itsdangerous))
(define-public python-pyyaml
(package
(name "python-pyyaml")
(version "3.13")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyYAML" version))
(sha256
(base32
"1gx603g484z46cb74j9rzr6sjlh2vndxayicvlyhxdz98lhhkwry"))))
(build-system python-build-system)
(inputs
`(("libyaml" ,libyaml)))
(home-page "http://pyyaml.org/wiki/PyYAML")
(synopsis "YAML parser and emitter for Python")
(description
"PyYAML is a YAML parser and emitter for Python. PyYAML features a
complete YAML 1.1 parser, Unicode support, pickle support, capable extension
API, and sensible error messages. PyYAML supports standard YAML tags and
provides Python-specific tags that allow to represent an arbitrary Python
object.")
(license license:expat)))
(define-public python2-pyyaml
(package-with-python2 python-pyyaml))
(define-public python-vine
(package
(name "python-vine")
(version "1.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "vine" version))
(sha256
(base32
"0wkskb2hb494v9gixqnf4bl972p4ibcmxdykzpwjlfa5picns4aj"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
("python-case" ,python-case)))
(home-page "https://github.com/celery/vine")
(synopsis "Promises for Python")
(description
"@code{vine} provides a special implementation of promises in that it can
be used both for \"promise of a value\" and lazy evaluation. The biggest
upside for this is that everything in a promise can also be a promise,
e.g. filters, callbacks and errbacks can all be promises.")
(license license:bsd-3)))
(define-public python-virtualenv
(package
(name "python-virtualenv")
(version "16.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "virtualenv" version))
(sha256
(base32
"0242cg3hdq3qdvx5flyrki8lpwlgwf5k45c21ks5049fv7ygm6gq"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'disable-failing-test
(lambda _
;; Disable failing test. See upstream bug report
;; https://github.com/pypa/virtualenv/issues/957
(substitute* "tests/test_virtualenv.py"
(("skipif.*") "skipif(True, reason=\"Guix\")\n"))
#t)))))
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)))
(home-page "https://virtualenv.pypa.io/")
(synopsis "Virtual Python environment builder")
(description
"Virtualenv is a tool to create isolated Python environments.")
(license license:expat)))
(define-public python2-virtualenv
(package-with-python2 python-virtualenv))
(define-public python-markupsafe
(package
(name "python-markupsafe")
(version "1.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/M/MarkupSafe/MarkupSafe-"
version ".tar.gz"))
(sha256
(base32
"0rdn1s8x9ni7ss8rfiacj7x1085lx8mh2zdwqslnw8xc3l4nkgm6"))))
(build-system python-build-system)
(home-page "https://github.com/mitsuhiko/markupsafe")
(synopsis "XML/HTML/XHTML markup safe string implementation for Python")
(description
"Markupsafe provides an XML/HTML/XHTML markup safe string implementation
for Python.")
(license license:bsd-3)))
(define-public python2-markupsafe
(package-with-python2 python-markupsafe))
(define-public python-jinja2
(package
(name "python-jinja2")
(version "2.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Jinja2" version))
(sha256
(base32
"190l36hfw3wb2n3n68yacjabxyb1pnxwn7vjx96cmjj002xy2jzq"))))
(build-system python-build-system)
(propagated-inputs
`(("python-markupsafe" ,python-markupsafe)))
(home-page "http://jinja.pocoo.org/")
(synopsis "Python template engine")
(description
"Jinja2 is a small but fast and easy to use stand-alone template engine
written in pure Python.")
(license license:bsd-3)))
(define-public python2-jinja2
(package-with-python2 python-jinja2))
(define-public python-pystache
(package
(name "python-pystache")
(version "0.5.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "pystache" version))
(sha256
(base32
"0nmqsfmiw4arjxqkmf9z66ml950pcdjk6aq4gin4sywmzdjw5fzp"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Python 3 tests are failing.
(home-page "http://defunkt.io/pystache/")
(synopsis "Python logic-less template engine")
(description
"Pystache is a Python implementation of the framework agnostic,
logic-free templating system Mustache.")
(license license:expat)
(properties `((python2-variant . ,(delay python2-pystache))))))
(define-public python2-pystache
(package (inherit (package-with-python2
(strip-python2-variant python-pystache)))
(arguments
`(#:python ,python-2
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "test_pystache.py"))))))))
(define-public python-joblib
(package
(name "python-joblib")
(version "0.13.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "joblib" version))
(sha256
(base32
"0612nazad8dxmn3xghfrmjax6456l4xy6hn9cngs7vydi14ds7v5"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "pytest" "-v" "joblib"))))))
(native-inputs
`(("python-pytest" ,python-pytest)))
(home-page "https://joblib.readthedocs.io/")
(synopsis "Using Python functions as pipeline jobs")
(description
"Joblib is a set of tools to provide lightweight pipelining in Python.
In particular, joblib offers: transparent disk-caching of the output values
and lazy re-evaluation (memoize pattern), easy simple parallel computing
logging and tracing of the execution.")
(license license:bsd-3)))
(define-public python2-joblib
(package-with-python2 python-joblib))
(define-public python-docutils
(package
(name "python-docutils")
(version "0.14")
(source
(origin
(method url-fetch)
(uri (pypi-uri "docutils" version))
(sha256
(base32
"0x22fs3pdmr42kvz6c654756wja305qv6cx1zbhwlagvxgr4xrji"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; no setup.py test command
(home-page "http://docutils.sourceforge.net/")
(synopsis "Python Documentation Utilities")
(description
"Docutils is a modular system for processing documentation into useful
formats, such as HTML, XML, and LaTeX. For input Docutils supports
reStructuredText.")
;; Most of the source code is public domain, but some source files are
;; licensed under the PFSL, BSD 2-clause, and GPLv3+ licenses.
(license (list license:public-domain license:psfl license:bsd-2 license:gpl3+))))
(define-public python2-docutils
(package-with-python2 python-docutils))
(define-public python-pygments
(package
(name "python-pygments")
(version "2.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pygments" version))
(sha256
(base32
"1k78qdvir1yb1c634nkv6rbga8wv4289xarghmsbbvzhvr311bnv"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests require sphinx, which depends on this.
'(#:tests? #f))
(home-page "http://pygments.org/")
(synopsis "Syntax highlighting")
(description
"Pygments is a syntax highlighting package written in Python.")
(license license:bsd-2)))
(define-public python2-pygments
(package-with-python2 python-pygments))
(define-public python-sphinxcontrib-websupport
(package
(name "python-sphinxcontrib-websupport")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "sphinxcontrib-websupport" version))
(sha256
(base32
"1ff3ix76xi1y6m99qxhaq5161ix9swwzydilvdya07mgbcvpzr4x"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests depend on Sphinx, which depends on this.
`(#:tests? #f))
(home-page "http://sphinx-doc.org/")
(synopsis "Sphinx API for web applications")
(description "This package provides a Python API to easily integrate
Sphinx documentation into your web application. It provides tools to
integrate Sphinx documents in web templates and to handle searches.")
(license license:bsd-3)))
(define-public python2-sphinxcontrib-websupport
(package-with-python2 python-sphinxcontrib-websupport))
(define-public python-sphinx
(package
(name "python-sphinx")
(version "1.7.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Sphinx" version))
(sha256
(base32
"0pkkbfj7cl157q550gcs45am5y78ps0h7q6455d64s1zmw01jlvi"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Requires Internet access.
(delete-file "tests/test_build_linkcheck.py")
(substitute* "tests/test_build_latex.py"
(("@pytest.mark.sphinx\\('latex', testroot='images'\\)")
"@pytest.mark.skip()"))
(when (which "python")
;; XXX: These tests are broken when using Python2:
;; <https://github.com/sphinx-doc/sphinx/issues/4710>.
(delete-file "tests/test_api_translator.py")
(delete-file "tests/test_setup_command.py"))
(invoke "make" "test"))))))
(propagated-inputs
`(("python-imagesize" ,python-imagesize)
("python-sphinx-alabaster-theme"
,python-sphinx-alabaster-theme)
("python-babel" ,python-babel)
("python-snowballstemmer" ,python-snowballstemmer)
("python-docutils" ,python-docutils)
("python-jinja2" ,python-jinja2)
("python-packaging" ,python-packaging)
("python-pygments" ,python-pygments)
("python-requests" ,python-requests)
("python-six" ,python-six)
("python-sphinxcontrib-websupport" ,python-sphinxcontrib-websupport)))
(native-inputs
`(("graphviz" ,graphviz)
("imagemagick" ,imagemagick) ;for "convert"
("python-html5lib" ,python-html5lib)
("python-mock" ,python-mock)
("python-nose" ,python-nose)
("python-pytest" ,python-pytest)))
(home-page "http://sphinx-doc.org/")
(synopsis "Python documentation generator")
(description "Sphinx is a tool that makes it easy to create documentation
for Python projects or other documents consisting of multiple reStructuredText
sources.")
(license license:bsd-3)
(properties `((python2-variant . ,(delay python2-sphinx))))))
(define-public python2-sphinx
(let ((base (package-with-python2 (strip-python2-variant python-sphinx))))
(package
(inherit base)
(native-inputs `(("python2-mock" ,python2-mock)
("python2-enum34" ,python2-enum34)
,@(package-native-inputs base)))
(propagated-inputs `(("python2-pytz" ,python2-pytz)
("python2-typing" ,python2-typing)
,@(package-propagated-inputs base))))))
(define-public python-sphinx-gallery
(package
(name "python-sphinx-gallery")
(version "0.1.13")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/sphinx-gallery/sphinx-gallery"
"/archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"03fs99mcb1r7qp0xixqv07vcz98sk21yq19ffdysi0infdcpzfkd"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests attempt to download <https://docs.python.org/3/objects.inv>,
;; <https://docs.scipy.org/doc/numpy/objects.inv>, and
;; <https://matplotlib.org/objects.inv>.
`(#:tests? #f))
(native-inputs
`(("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://sphinx-gallery.github.io/")
(synopsis "Generate an examples gallery automatically")
(description
"@code{sphinx_gallery} is a Sphinx extension that builds an HTML version
from any set of Python scripts and puts it into an examples gallery.")
(license license:bsd-3)))
(define-public python2-sphinx-gallery
(package-with-python2 python-sphinx-gallery))
(define-public python-sphinx-rtd-theme
(package
(name "python-sphinx-rtd-theme")
(version "0.2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sphinx_rtd_theme" version))
(sha256
(base32
"05rlhjzdyapr2w74jjs7mrm8hi69qskcr5vya9f9drpsys7lpxrd"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; No tests.
(propagated-inputs
`(("python-sphinx" ,python-sphinx)))
(home-page "https://github.com/snide/sphinx_rtd_theme/")
(synopsis "ReadTheDocs.org theme for Sphinx")
(description "A theme for Sphinx used by ReadTheDocs.org.")
(license license:expat)))
(define-public python2-sphinx-rtd-theme
(package-with-python2 python-sphinx-rtd-theme))
(define-public python-guzzle-sphinx-theme
(package
(name "python-guzzle-sphinx-theme")
(version "0.7.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "guzzle_sphinx_theme" version))
(sha256
(base32
"1rnkzrrsbnifn3vsb4pfaia3nlvgvw6ndpxp7lzjrh23qcwid34v"))))
(build-system python-build-system)
(propagated-inputs
`(("python-sphinx" ,python-sphinx)))
(home-page "https://github.com/guzzle/guzzle_sphinx_theme")
(synopsis "Sphinx theme used by Guzzle")
(description "This package provides guzzle_sphinx_theme, a theme for the
Sphinx documentation system, used by @uref{http://docs.guzzlephp.org, Guzzle}
and several other projects.")
(license license:expat)))
(define-public python2-guzzle-sphinx-theme
(package-with-python2 python-guzzle-sphinx-theme))
(define-public python-rst.linker
(package
(name "python-rst.linker")
(version "1.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rst.linker" version))
(sha256
(base32
"0iqaacp7pj1s8avs4kc0qg0r7dscywaq37y6l9j14glqdikk0wdj"))))
(build-system python-build-system)
(propagated-inputs
`(("python-dateutil" ,python-dateutil)
("python-six" ,python-six)))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)))
;; Test would require path.py, which would introduce a cyclic dependence.
(arguments `(#:tests? #f))
;; Note: As of version 1.7 the documentation is not worth building.
(home-page "https://github.com/jaraco/rst.linker")
(synopsis "Sphinx plugin to add links and timestamps")
(description "rst.linker allows to automatically replace text by a
reStructuredText external reference or timestamps. It's primary purpose is to
augment the changelog, but it can be used for other documents, too.")
(license license:expat)))
(define-public python2-rst.linker
(package-with-python2 python-rst.linker))
(define-public python-feedgenerator
(package
(name "python-feedgenerator")
(version "1.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "feedgenerator" version))
(sha256
(base32
"01mirwkm7xfx539hmvj7g9da1j51gw5lsx74dr0glizskjm5vq2s"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove pre-compiled .pyc files from source.
(for-each delete-file-recursively
(find-files "." "__pycache__" #:directories? #t))
(for-each delete-file (find-files "." "\\.pyc$"))
#t))))
(build-system python-build-system)
(propagated-inputs
`(("python-pytz" ,python-pytz)
("python-six" ,python-six)))
(home-page "https://github.com/getpelican/feedgenerator")
(synopsis
"Standalone version of Django's Atom/RSS feed generator")
(description
"Feedgenerator-py3k is a standalone version of Django's feedgenerator,
which can produce feeds in RSS 2.0, RSS 0.91, and Atom formats.")
(license license:bsd-3)))
(define-public python2-feedgenerator
(package-with-python2 python-feedgenerator))
(define-public python-toml
(package
(name "python-toml")
(version "0.9.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toml" version))
(sha256
(base32
"0bdbpbip67wdm6c7xwc6mmbmskyradj4cdxn1iibj4fcx1nbv1lf"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;no tests suite in release
(home-page "https://github.com/uiri/toml")
(synopsis "Library for TOML")
(description
"@code{toml} is a library for parsing and creating Tom's Obvious, Minimal
Language (TOML) configuration files.")
(license license:expat)))
(define-public python-black
(package
(name "python-black")
(version "18.6b4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "black" version))
(sha256
(base32
"0i4sfqgz6w15vd50kbhi7g7rifgqlf8yfr8y78rypd56q64qn592"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'patch-source-shebangs 'patch-extra-shebangs
(lambda _
(let ((python3 (which "python3")))
(substitute* '("tests/data/fmtonoff.py"
"tests/data/string_prefixes.py"
"tests/data/function.py")
(("#!/usr/bin/env python3(\\.[0-9]+)?" _ minor-version)
(string-append "#!" python3 (if (string? minor-version)
minor-version
""))))))))))
(propagated-inputs
`(("python-click" ,python-click)
("python-attrs" ,python-attrs)
("python-appdirs" ,python-appdirs)
("python-toml" ,python-toml)))
(home-page "https://github.com/ambv/black")
(synopsis "The uncompromising code formatter")
(description "Black is the uncompromising Python code formatter.")
(license license:expat)))
(define-public python-blinker
(package
(name "python-blinker")
(version "1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "blinker" version))
(sha256
(base32
"1dpq0vb01p36jjwbhhd08ylvrnyvcc82yxx3mwjx6awrycjyw6j7"))))
(build-system python-build-system)
(home-page "http://pythonhosted.org/blinker/")
(synopsis "Fast, simple object-to-object and broadcast signaling")
(description
"Blinker provides a fast dispatching system that allows any number of
interested parties to subscribe to events, or \"signals\".")
(license license:expat)))
(define-public python2-blinker
(package-with-python2 python-blinker))
(define-public pelican
(package
(name "pelican")
(version "3.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pelican" version))
(sha256
(base32
"12spygavv9b6xpb5pgp7f0p3z0mms60nx6zrpx1yfkj68zz4flra"))))
(build-system python-build-system)
(propagated-inputs
`(("python-feedgenerator" ,python-feedgenerator)
("python-jinja2" ,python-jinja2)
("python-pygments" ,python-pygments)
("python-docutils" ,python-docutils)
("python-pytz" ,python-pytz)
("python-blinker" ,python-blinker)
("python-unidecode" ,python-unidecode)
("python-six" ,python-six)
("python-dateutil" ,python-dateutil)
("python-markdown" ,python-markdown)))
(home-page "https://getpelican.com/")
(arguments
`(;; XXX Requires a lot more packages to do unit tests :P
#:tests? #f
#:phases (modify-phases %standard-phases
(add-before
'install 'adjust-requires
;; Since feedgenerator is installed from git, it doesn't
;; conform to the version requirements.
;;
;; We *do have* "feedgenerator >= 1.6", but strip off the
;; version requirement so setuptools doesn't get confused.
(lambda _
(substitute* "setup.py"
(("['\"]feedgenerator.*?['\"]")
"'feedgenerator'")))))))
(synopsis "Python-based static site publishing system")
(description
"Pelican is a tool to generate a static blog from reStructuredText,
Markdown input files, and more. Pelican uses Jinja2 for templating
and is very extensible.")
(license license:agpl3+)))
(define-public python-scikit-image
(package
(name "python-scikit-image")
(version "0.14.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scikit-image" version))
(sha256
(base32 "0l1c3rl4s1jyv80i5hns4pgih09zrxfj7lygdc51w8sgyysb7ac6"))))
(build-system python-build-system)
(arguments
;; TODO: Some tests require running X11 server. Disable them?
'(#:tests? #f))
;; See DEPENDS.txt for the list of build and run time requiremnts
(propagated-inputs
`(("python-cloudpickle" ,python-cloudpickle)
("python-dask" ,python-dask)
("python-matplotlib" ,python-matplotlib)
("python-networkx" ,python-networkx)
("python-numpy" ,python-numpy)
("python-pillow" ,python-pillow)
("python-pywavelets" ,python-pywavelets)
("python-scipy" ,python-scipy)
("python-six" ,python-six)))
(native-inputs
`(("python-cython" ,python-cython)))
(home-page "http://scikit-image.org/")
(synopsis "Image processing in Python")
(description
"Scikit-image is a collection of algorithms for image processing.")
(license license:bsd-3)))
(define-public python2-scikit-image
(package-with-python2 python-scikit-image))
(define-public python-cython
(package
(name "python-cython")
(version "0.28.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32
"0imw9s2rbrh32clbl10csnwmig9p3nzkrd2baxxxfmnrsc42pb3n"))))
(build-system python-build-system)
;; we need the full python package and not just the python-wrapper
;; because we need libpython3.3m.so
(inputs
`(("python" ,python)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-HOME
;; some tests require access to "$HOME/.cython"
(lambda _ (setenv "HOME" "/tmp") #t))
;; FIXME: These tests started failing on armhf after the 0.28 update
;; (commit c69d11c5930), both with an error such as this:
;; compiling (cpp) and running dictcomp ...
;; === C/C++ compiler error output: ===
;; ‘
;; dictcomp.cpp:5221: confused by earlier errors, bailing out
;; See <https://hydra.gnu.org/build/2948724> for logs.
,@(if (target-arm32?)
`((add-before 'check 'disable-failing-tests
(lambda _
(let ((disabled-tests (open-file "tests/bugs.txt" "a")))
(for-each (lambda (test)
(format disabled-tests "~a\n" test))
'("memslice" "dictcomp"))
(close-port disabled-tests)))))
'())
(replace 'check
(lambda _
;; The "with_outer_raising" test fails with Python 3.7. See
;; https://github.com/cython/cython/issues/2454
(delete-file "tests/run/generators_py.py")
(invoke "python" "runtests.py" "-vv"))))))
(home-page "http://cython.org/")
(synopsis "C extensions for Python")
(description "Cython is an optimising static compiler for both the Python
programming language and the extended Cython programming language. It makes
writing C extensions for Python as easy as Python itself.")
(license license:asl2.0)
(properties `((python2-variant . ,(delay python2-cython))))))
(define-public python2-cython
(package (inherit (package-with-python2
(strip-python2-variant python-cython)))
(name "python2-cython")
(inputs
`(("python-2" ,python-2))))) ; this is not automatically changed
;; The RPython toolchain currently does not support Python 3.
(define-public python2-rpython
(package
(name "python2-rpython")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rpython" version))
(sha256
(base32
"02z9cvxf0y41dcvwnvf2zn0albhhw1drvjjbq27m6i1piw1k6fc0"))))
(build-system python-build-system)
(arguments `(#:python ,python-2))
(native-inputs
`(("python2-pytest" ,python2-pytest))) ; needed for running tests
(home-page "https://rpython.readthedocs.org")
(synopsis "Framework for implementing interpreters and virtual machines")
(description "RPython is a translation and support framework for
producing implementations of dynamic languages, emphasizing a clean separation
between language specification and implementation aspects.")
(license license:expat)))
;; NOTE: when upgrading numpy please make sure that python-pandas and
;; python-scipy still build, as these three packages are often used together.
(define-public python-numpy
(package
(name "python-numpy")
(version "1.15.4")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/numpy/numpy/releases/download/v"
version "/numpy-" version ".tar.gz"))
(sha256
(base32
"102vcl2qq4pjbm7a3d67vkkvn4466ngia1d8wi5avqwqh8j0jvkn"))))
(build-system python-build-system)
(inputs
`(("openblas" ,openblas)
("lapack" ,lapack)))
(native-inputs
`(("python-cython" ,python-cython)
("python-pytest" ,python-pytest)
("gfortran" ,gfortran)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'configure-blas-lapack
(lambda* (#:key inputs #:allow-other-keys)
(call-with-output-file "site.cfg"
(lambda (port)
(format port
"[openblas]
libraries = openblas
library_dirs = ~a/lib
include_dirs = ~a/include
# backslash-n to make emacs happy
\n[lapack]
lapack_libs = lapack
library_dirs = ~a/lib
include_dirs = ~a/include
"
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas")
(assoc-ref inputs "lapack")
(assoc-ref inputs "lapack"))))
#t))
(add-before 'build 'fix-executable-paths
(lambda* (#:key inputs #:allow-other-keys)
;; Make /gnu/store/...-bash-.../bin/sh the default shell,
;; instead of /bin/sh.
(substitute* "numpy/distutils/exec_command.py"
(("(os.environ.get\\('SHELL', ')(/bin/sh'\\))" match match-start match-end)
(string-append match-start (assoc-ref inputs "bash") match-end)))
;; Use "gcc" executable, not "cc".
(substitute* "numpy/distutils/system_info.py"
(("c = distutils\\.ccompiler\\.new_compiler\\(\\)")
"c = distutils.ccompiler.new_compiler(); c.set_executables(compiler='gcc',compiler_so='gcc',linker_exe='gcc',linker_so='gcc -shared')"))
#t))