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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages opencog)
#:use-module (gnu packages)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages databases)
#:use-module (gnu packages guile)
#:use-module (gnu packages language)
#:use-module (gnu packages linux)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix build-system cmake)
#:use-module (guix utils))
(define-public cogutil
;; The last release was in 2016. Other OpenCog packages require a later
;; version.
(let ((commit "b07b41b2eaf01627c78b27f1f28bb09ef7086f8e")
(revision "1"))
(package
(name "cogutil")
(version (git-version "2.0.3" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/cogutil")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1ymmcrinp0prlxsmxmwdjjl4kgaj7wzq39d5b1q2apgg94yfdhqb"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"))
(inputs
`(("boost" ,boost)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/cogutil/")
(synopsis "Low-level C++ programming utilities used by OpenCog components")
(description "The OpenCog utilities is a miscellaneous collection of C++
utilities use for typical programming tasks in multiple OpenCog projects.")
;; Either of these licenses.
(license (list license:agpl3 license:asl2.0)))))
(define-public atomspace
;; The last release was in 2016 and doesn't build with our Boost package.
(let ((commit "86c848dfc7135b3c47deb581f8da54a60f6711c9")
(revision "1"))
(package
(name "atomspace")
(version (git-version "5.0.3" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/atomspace")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0vxzhszb0z8081li38hid07a5axzxyflsmq1mcn4b1k4z1j8ggch"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list (string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("boost" ,boost)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)
("postgresql" ,postgresql)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/atomspace/")
(synopsis "OpenCog hypergraph database, query system and rule engine")
(description "The OpenCog AtomSpace is an in-RAM @dfn{knowledge
representation} (KR) database, an associated query engine and graph-re-writing
system, and a rule-driven inferencing engine that can apply and manipulate
sequences of rules to perform reasoning. It is a layer that sits on top of
ordinary distributed (graph) databases, providing a large variety of advanced
features not otherwise available.")
(license license:agpl3))))
(define-public cogserver
;; There are no releases.
(let ((commit "ec5f3b9590db0f6a085b5d0320f5d3710e0f1635")
(revision "2"))
(package
(name "cogserver")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/cogserver")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1h0vcxb6n5dc654xqinqcxc7dxwcs6bsywgir8rhrqiykk760mzl"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list (string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("atomspace" ,atomspace)
("boost" ,boost)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/cogserver/")
(synopsis "OpenCog network server")
(description "The OpenCog Cogserver is a network and job server for the
OpenCog framework.")
(license license:agpl3))))
(define-public attention
;; There are no releases.
(let ((commit "87d43679280ce486cd6757765d2e1df6d502991d")
(revision "1"))
(package
(name "attention")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/attention")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0sndslphicv6w9qpag168rqkxq5sf71l5qbfx6zhsd5bzlf5fhwv"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("atomspace" ,atomspace)
("boost" ,boost)
("cogserver" ,cogserver)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/attention/")
(synopsis "OpenCog attention allocation subsystem")
(description "Attention Allocation is an OpenCog subsystem meant to
control the application of processing and memory resources to specific
tasks.")
(license license:agpl3))))
(define-public opencog
;; There are no recent releases.
(let ((commit "ceac90507610cb2d0ee98f97a2086865292b1204")
(revision "1"))
(package
(name "opencog")
(version (git-version "0.1.4" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/opencog")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1j8wv910fvrmph370wv5pv2f4bc2s9vl6i7bw3pkmwbdhxkhjbhm"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("attention" ,attention)
("atomspace" ,atomspace)
("boost" ,boost)
("cogserver" ,cogserver)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)
("libuuid" ,util-linux "lib")
("link-grammar" ,link-grammar)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/attention/")
(synopsis "Framework for integrated artificial intelligence")
(description "OpenCog is a framework for developing AI systems,
especially appropriate for integrative multi-algorithm systems, and artificial
general intelligence systems. It currently contains a functional core
framework, and a number of cognitive agents at varying levels of completion,
some already displaying interesting and useful functionalities alone and in
combination.")
(license license:agpl3))))
(define-public agi-bio
;; There are no releases.
(let ((commit "b5c6f3d99e8cca3798bf0cdf2c32f4bdb8098efb")
(revision "1"))
(package
(name "agi-bio")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/agi-bio")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0c3q0nhmd03nvqm1ih10y28n596cjvfhkcfvzw2fmz1sn3ywdah4"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; there are none
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-unqualified-load
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "bioscience/bioscience.scm"
(("\\(load \"bioscience/types/bioscience_types.scm\"\\)")
(format #f "(load \"~a/bioscience/types/bioscience_types.scm\")"
(string-append (assoc-ref outputs "out")
"/share/guile/site/2.2/opencog"))))
#t)))))
(inputs
`(("atomspace" ,atomspace)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/agi-bio")
(synopsis "Genomic and proteomic data exploration and pattern mining")
(description "This is a package for genomic and proteomic research using
the OpenCog toolset with Guile. This includes experiments in applying pattern
mining and other OpenCog components.")
(license license:agpl3))))