Browse Source

gnu: express: Update to 1.5.3.

* gnu/packages/bioinformatics.scm (express): Update to 1.5.3.
[source]: Fetch from Github.
[arguments]: Add phase "remove-update-check".
wip-haskell-updates-2
Ricardo Wurmus 2 years ago
parent
commit
acba72b914
No known key found for this signature in database GPG Key ID: 197A5888235FACAC
  1. 20
      gnu/packages/bioinformatics.scm

20
gnu/packages/bioinformatics.scm

@ -3050,16 +3050,16 @@ dynamic programming or a variety of heuristics.")
(define-public express
(package
(name "express")
(version "1.5.1")
(version "1.5.3")
(source (origin
(method url-fetch)
(uri
(string-append
"http://bio.math.berkeley.edu/eXpress/downloads/express-"
version "/express-" version "-src.tgz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/adarob/eXpress.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"03rczxd0gjp2l1jxcmjfmf5j94j77zqyxa6x063zsc585nj40n0c"))))
"18nb22n7x820fzjngf4qgyb3mspqkw7xyk7v7s5ps6wfrd8qwscb"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ;no "check" target
@ -3076,6 +3076,12 @@ dynamic programming or a variety of heuristics.")
(("\\$\\{CMAKE_CURRENT_SOURCE_DIR\\}/\\.\\./bamtools/lib")
(string-append (assoc-ref inputs "bamtools") "/lib"))
(("libprotobuf.a") "libprotobuf.so"))
#t))
(add-after 'unpack 'remove-update-check
(lambda _
(substitute* "src/main.cpp"
(("#include \"update_check.h\"") "")
(("check_version\\(PACKAGE_VERSION\\);") ""))
#t)))))
(inputs
`(("boost" ,boost)

Loading…
Cancel
Save