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gnu: ceph: Update to 12.2.4.

* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to
upstream changes.
* gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file.
* gnu/packages/patches/ceph-rocksdb-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 12.2.4.
[source](patches): Adjust.
[arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags.  Build with
CMAKE-3.11.  Adjust file substitutions.  Wrap 'ceph' executable.
[native-inputs]: Add GPERF.
[inputs]: Replace BOOST with BOOST-1.66.  Add PYTHON2-PRETTYTABLE.
python-updates
Marius Bakke 4 years ago
parent
commit
5b0b520e22
No known key found for this signature in database GPG Key ID: A2A06DF2A33A54FA
  1. 2
      gnu/local.mk
  2. 64
      gnu/packages/patches/ceph-disable-cpu-optimizations.patch
  3. 52
      gnu/packages/patches/ceph-disable-unittest-throttle.patch
  4. 63
      gnu/packages/patches/ceph-rocksdb-compat.patch
  5. 42
      gnu/packages/storage.scm

2
gnu/local.mk

@ -581,7 +581,7 @@ dist_patch_DATA = \
%D%/packages/patches/cdparanoia-fpic.patch \
%D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch \
%D%/packages/patches/ceph-disable-cpu-optimizations.patch \
%D%/packages/patches/ceph-disable-unittest-throttle.patch \
%D%/packages/patches/ceph-rocksdb-compat.patch \
%D%/packages/patches/ceph-skip-collect-sys-info-test.patch \
%D%/packages/patches/ceph-skip-unittest_blockdev.patch \
%D%/packages/patches/chmlib-inttypes.patch \

64
gnu/packages/patches/ceph-disable-cpu-optimizations.patch

@ -1,5 +1,4 @@
Disable CPU optimizations not supported by all x86_64 systems. Also
don't add anything for i686.
Disable CPU optimizations not supported by all x86_64 systems.
--- a/cmake/modules/SIMDExt.cmake 2017-03-23 22:22:58.254071694 +0100
+++ b/cmake/modules/SIMDExt.cmake 2017-03-23 22:23:22.446848845 +0100
@ -15,39 +14,30 @@ don't add anything for i686.
#
# SIMD_COMPILE_FLAGS
#
@@ -73,7 +68,7 @@
set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -mfpu=neon")
endif()
-elseif(CMAKE_SYSTEM_PROCESSOR MATCHES "i386|i686|amd64|x86_64|AMD64")
+elseif(CMAKE_SYSTEM_PROCESSOR MATCHES "amd64|x86_64|AMD64")
set(HAVE_INTEL 1)
CHECK_C_COMPILER_FLAG(-msse HAVE_INTEL_SSE)
if(HAVE_INTEL_SSE)
@@ -83,26 +78,6 @@
if(HAVE_INTEL_SSE2)
set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse2")
endif()
- CHECK_C_COMPILER_FLAG(-msse3 HAVE_INTEL_SSE3)
- if(HAVE_INTEL_SSE3)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse3")
- endif()
- CHECK_C_COMPILER_FLAG(-mssse3 HAVE_INTEL_SSSE3)
- if(HAVE_INTEL_SSSE3)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -mssse3")
- endif()
- CHECK_C_COMPILER_FLAG(-mpclmul HAVE_INTEL_PCLMUL)
- if(HAVE_INTEL_PCLMUL)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -mpclmul")
- endif()
- CHECK_C_COMPILER_FLAG(-msse4.1 HAVE_INTEL_SSE4_1)
- if(HAVE_INTEL_SSE4_1)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse4.1")
- endif()
- CHECK_C_COMPILER_FLAG(-msse4.2 HAVE_INTEL_SSE4_2)
- if(HAVE_INTEL_SSE4_2)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse4.2")
- endif()
@@ -85,26 +80,6 @@
if(HAVE_INTEL_SSE2)
set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse2")
endif()
- CHECK_C_COMPILER_FLAG(-msse3 HAVE_INTEL_SSE3)
- if(HAVE_INTEL_SSE3)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse3")
- endif()
- CHECK_C_COMPILER_FLAG(-mssse3 HAVE_INTEL_SSSE3)
- if(HAVE_INTEL_SSSE3)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -mssse3")
- endif()
- CHECK_C_COMPILER_FLAG(-mpclmul HAVE_INTEL_PCLMUL)
- if(HAVE_INTEL_PCLMUL)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -mpclmul")
- endif()
- CHECK_C_COMPILER_FLAG(-msse4.1 HAVE_INTEL_SSE4_1)
- if(HAVE_INTEL_SSE4_1)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse4.1")
- endif()
- CHECK_C_COMPILER_FLAG(-msse4.2 HAVE_INTEL_SSE4_2)
- if(HAVE_INTEL_SSE4_2)
- set(SIMD_COMPILE_FLAGS "${SIMD_COMPILE_FLAGS} -msse4.2")
- endif()
endif(CMAKE_SYSTEM_PROCESSOR MATCHES "amd64|x86_64|AMD64")
endif(CMAKE_SYSTEM_PROCESSOR MATCHES "i686|amd64|x86_64|AMD64")
elseif(CMAKE_SYSTEM_PROCESSOR MATCHES "(powerpc|ppc)64le")
set(HAVE_PPC64LE 1)
message(STATUS " we are ppc64le")

52
gnu/packages/patches/ceph-disable-unittest-throttle.patch

@ -1,52 +0,0 @@
FIXME: This test broke after the gcc-5/glibc-2.25 core-updates merge.
Not sure what's going on here, it hangs after spawning the first thread.
diff --git a/src/test/common/Throttle.cc b/src/test/common/Throttle.cc
index 5b6d73217d..40a477b2a3 100644
--- a/src/test/common/Throttle.cc
+++ b/src/test/common/Throttle.cc
@@ -216,44 +216,6 @@ TEST_F(ThrottleTest, wait) {
} while(!waited);
}
-TEST_F(ThrottleTest, destructor) {
- Thread_get *t;
- {
- int64_t throttle_max = 10;
- Throttle *throttle = new Throttle(g_ceph_context, "throttle", throttle_max);
-
- ASSERT_FALSE(throttle->get(5));
-
- t = new Thread_get(*throttle, 7);
- t->create("t_throttle");
- bool blocked;
- useconds_t delay = 1;
- do {
- usleep(delay);
- if (throttle->get_or_fail(1)) {
- throttle->put(1);
- blocked = false;
- } else {
- blocked = true;
- }
- delay *= 2;
- } while(!blocked);
- delete throttle;
- }
-
- { //
- // The thread is left hanging, otherwise it will abort().
- // Deleting the Throttle on which it is waiting creates a
- // inconsistency that will be detected: the Throttle object that
- // it references no longer exists.
- //
- pthread_t id = t->get_thread_id();
- ASSERT_EQ(pthread_kill(id, 0), 0);
- delete t;
- ASSERT_EQ(pthread_kill(id, 0), 0);
- }
-}
-
std::pair<double, std::chrono::duration<double> > test_backoff(
double low_threshhold,
double high_threshhold,

63
gnu/packages/patches/ceph-rocksdb-compat.patch

@ -0,0 +1,63 @@
Fix compatibility with newer versions of RocksDB.
Adapted from this upstream patch, with some additional changes for 12.2:
https://github.com/ceph/ceph/commit/9d73a7121fdb1ae87cb1aa6f7d9d7a13f329ae68
diff --git a/src/kv/RocksDBStore.cc b/src/kv/RocksDBStore.cc
index 8660afe1886d..bc0de79e23cb 100644
--- a/src/kv/RocksDBStore.cc
+++ b/src/kv/RocksDBStore.cc
@@ -505,7 +505,7 @@
// considering performance overhead, default is disabled
if (g_conf->rocksdb_perf) {
rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex);
- rocksdb::perf_context.Reset();
+ rocksdb::get_perf_context()->Reset();
}
RocksDBTransactionImpl * _t =
@@ -532,13 +532,13 @@
utime_t write_wal_time;
utime_t write_pre_and_post_process_time;
write_wal_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_wal_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_wal_time)/1000000000);
write_memtable_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_memtable_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_memtable_time)/1000000000);
write_delay_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_delay_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_delay_time)/1000000000);
write_pre_and_post_process_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000);
logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time);
logger->tinc(l_rocksdb_write_delay_time, write_delay_time);
logger->tinc(l_rocksdb_write_wal_time, write_wal_time);
@@ -558,7 +558,7 @@
// considering performance overhead, default is disabled
if (g_conf->rocksdb_perf) {
rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex);
- rocksdb::perf_context.Reset();
+ rocksdb::get_perf_context()->Reset();
}
RocksDBTransactionImpl * _t =
@@ -586,13 +586,13 @@
utime_t write_wal_time;
utime_t write_pre_and_post_process_time;
write_wal_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_wal_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_wal_time)/1000000000);
write_memtable_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_memtable_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_memtable_time)/1000000000);
write_delay_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_delay_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_delay_time)/1000000000);
write_pre_and_post_process_time.set_from_double(
- static_cast<double>(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000);
+ static_cast<double>(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000);
logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time);
logger->tinc(l_rocksdb_write_delay_time, write_delay_time);
logger->tinc(l_rocksdb_write_wal_time, write_wal_time);

42
gnu/packages/storage.scm

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017, 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
;;;
;;; This file is part of GNU Guix.
@ -29,6 +29,7 @@
#:use-module (gnu packages bdw-gc)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
#:use-module (gnu packages crypto)
#:use-module (gnu packages cryptsetup)
@ -36,6 +37,7 @@
#:use-module (gnu packages databases)
#:use-module (gnu packages disk)
#:use-module (gnu packages gnuzilla)
#:use-module (gnu packages gperf)
#:use-module (gnu packages jemalloc)
#:use-module (gnu packages linux)
#:use-module (gnu packages lua)
@ -50,18 +52,18 @@
(define-public ceph
(package
(name "ceph")
(version "12.0.2")
(version "12.2.4")
(source (origin
(method url-fetch)
(uri (string-append "https://download.ceph.com/tarballs/ceph-"
version ".tar.gz"))
(sha256
(base32
"0l9v072ba28i984y5rwny9i11nmpyx5bl7awxg48plyadm2l3g14"))
"13hv8scaxc1gdvrhzbfnsk4yy3pla6n1i4j4j4zf7schmbf0j8mp"))
(patches
(search-patches "ceph-skip-unittest_blockdev.patch"
"ceph-skip-collect-sys-info-test.patch"
"ceph-disable-unittest-throttle.patch"
"ceph-rocksdb-compat.patch"
"ceph-disable-cpu-optimizations.patch"))
(modules '((guix build utils)))
(snippet
@ -74,7 +76,6 @@
;"src/xxHash"
;"src/zstd"
;"src/civetweb"
;"src/Beast"
"src/test/downloads"
"src/dpdk"
"src/spdk"
@ -105,6 +106,7 @@
"-DWITH_SYSTEM_BOOST=ON"
"-DWITH_PYTHON3=ON"
;; TODO: Enable these when available in Guix.
"-DWITH_BABELTRACE=OFF"
"-DWITH_LTTNG=OFF"
"-DWITH_XFS=OFF"
"-DWITH_XIO=OFF"
@ -114,6 +116,7 @@
;; <https://bugs.gnu.org/29674> for details. Disable tests until
;; resolved.
#:tests? #f
#:cmake ,cmake-3.11
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-source
@ -152,21 +155,17 @@
(substitute* "src/test/test_subprocess.cc"
(("/bin/sh") (which "sh")))
(substitute* "src/test/ceph_objectstore_tool.py"
(substitute* "qa/standalone/special/ceph_objectstore_tool.py"
(("/bin/rm") (which "rm")))
(substitute* "src/ceph-disk/ceph_disk/main.py"
(("/bin/mount") "mount")
(("/bin/umount") "umount")
(("/sbin/blkid") (which "blkid"))
(("'cryptsetup'") (string-append "'" (which "cryptsetup") "'"))
(("'sgdisk'") (string-append "'" (which "sgdisk") "'"))
(("'parted'") (string-append "'" (which "parted") "'"))
(("'udevadm'") (string-append "'" (which "udevadm") "'")))
(substitute* "src/ceph-disk-udev"
(("/sbin/cryptsetup") (which "cryptsetup"))
(("/usr/sbin/sgdisk") (which "sgdisk"))
(("/usr/sbin/ceph-disk")
(string-append out "/bin/ceph-disk")))
(substitute* "udev/50-rbd.rules"
(("/usr/bin/ceph-rbdnamer")
(string-append out "/bin/ceph-rbdnamer")))
@ -263,23 +262,31 @@
(getenv "PYTHONPATH")))
#t)))
(add-after 'install 'wrap-python-scripts
(lambda* (#:key outputs #:allow-other-keys)
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(ceph (string-append out "/bin/ceph"))
(ceph-disk (string-append out "/bin/ceph-disk"))
(ceph-detect-init (string-append
out "/bin/ceph-detect-init"))
(PYTHONPATH (string-append
out "/lib/python2.7/site-packages")))
(prettytable (assoc-ref inputs "python2-prettytable"))
(sitedir (lambda (package)
(string-append package
"/lib/python2.7/site-packages")))
(PYTHONPATH (string-append
(sitedir out) ":"
(sitedir prettytable))))
(for-each (lambda (executable)
(wrap-program executable
`("PYTHONPATH" ":" prefix (,PYTHONPATH))))
(list ceph-disk ceph-detect-init))
(list ceph ceph-disk ceph-detect-init))
#t))))))
(outputs
'("out" "lib"))
(native-inputs
`(("pkg-config" ,pkg-config)
`(("gperf" ,gperf)
("pkg-config" ,pkg-config)
("python-cython" ,python-cython)
("python-sphinx" ,python-sphinx)
("yasm" ,yasm)
@ -310,7 +317,7 @@
("python2-testtools" ,python2-testtools)
("python2-tox" ,python2-tox)))
(inputs
`(("boost" ,boost)
`(("boost" ,boost-1.66)
("curl" ,curl)
("cryptsetup" ,cryptsetup)
("expat" ,expat)
@ -329,6 +336,7 @@
("nss" ,nss)
("parted" ,parted)
("python@2" ,python-2)
("python2-prettytable" ,python2-prettytable) ;used by ceph_daemon.py
("python@3" ,python-3)
("rocksdb" ,rocksdb)
("snappy" ,snappy)

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