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gnu: Add r-motifdb.

* gnu/packages/bioconductor.scm (r-motifdb): New variable.
gn-latest-20200428
Roel Janssen 1 year ago
parent
commit
3699bcf54a
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  1. 24
      gnu/packages/bioconductor.scm

24
gnu/packages/bioconductor.scm

@ -3998,6 +3998,30 @@ database (e.g. JASPAR). It can also be used to visualize motifs, motif
distributions, modules and filter motifs.")
(license license:gpl2)))
(define-public r-motifdb
(package
(name "r-motifdb")
(version "1.28.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "MotifDb" version))
(sha256
(base32 "0m5apkjlvdq9yhjdyds3hivfnkbm6f059hy2bkjhalrlhd2si2jc"))))
(properties `((upstream-name . "MotifDb")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-iranges" ,r-iranges)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-splitstackshape" ,r-splitstackshape)))
(home-page "https://www.bioconductor.org/packages/MotifDb/")
(synopsis "Annotated collection of protein-DNA binding sequence motifs")
(description "This package provides more than 2000 annotated position
frequency matrices from nine public sources, for multiple organisms.")
(license license:artistic2.0)))
(define-public r-motifstack
(package
(name "r-motifstack")

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