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gnu: Add r-coverageview.

* gnu/packages/bioconductor.scm (r-coverageview): New variable.
wip-gnome3.36
Roel Janssen 2 years ago
parent
commit
0c0ef9c5a6
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  1. 27
      gnu/packages/bioconductor.scm

27
gnu/packages/bioconductor.scm

@ -1069,6 +1069,33 @@ examples' of Affymetrix data, unlike the artificial examples included in the
package @code{affy}.")
(license license:gpl2+)))
(define-public r-coverageview
(package
(name "r-coverageview")
(version "1.24.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "CoverageView" version))
(sha256
(base32
"0s47svs7xnr9jkylq0dxidqrigihdddiprcl0951vjr4w7kmb5nf"))))
(build-system r-build-system)
(propagated-inputs
`(("r-s4vectors" ,r-s4vectors)
("r-iranges" ,r-iranges)
("r-genomicranges" ,r-genomicranges)
("r-genomicalignments" ,r-genomicalignments)
("r-rtracklayer" ,r-rtracklayer)
("r-rsamtools" ,r-rsamtools)))
(home-page "https://bioconductor.org/packages/CoverageView/")
(synopsis "Coverage visualization package for R")
(description "This package provides a framework for the visualization of
genome coverage profiles. It can be used for ChIP-seq experiments, but it can
be also used for genome-wide nucleosome positioning experiments or other
experiment types where it is important to have a framework in order to inspect
how the coverage distributed across the genome.")
(license license:artistic2.0)))
(define-public r-curatedtcgadata
(package
(name "r-curatedtcgadata")

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