1207 Commits (e438bb8ffa9f1bf03d57c1ec723506a95cba8ab4)
 

Author SHA1 Message Date
Efraim Flashner e438bb8ffa
work on packaging bazel 9 months ago
pjotrp 01cbe5a2e9 Moved packages into past/genenetwork1 and packages/pangenome to reduce chance of 9 months ago
pjotrp eb97761d7f Remove golang module loader 9 months ago
Pjotr Prins 82d0c5cc93 genenetwork[23]: updated git checkout and commented out DAG generation 9 months ago
Pjotr Prins c47ed18241 Removed tls warning 9 months ago
Pjotr Prins cabac15be8 Removed tls to remove warnings 9 months ago
pjotrp 9565dbbf4e gemma: bump to 0.98.5-pre 9 months ago
pjotrp cffb080134 gemma-wrapper: update to 0.99.3 9 months ago
Efraim Flashner e1b776b1d7
gn: Add missing import 9 months ago
Efraim Flashner 6b05f2e196
gn: make sure we use the correct rust version 9 months ago
Bonface Munyoki ac3cdf57e7
Remove csv-diff from channel. 9 months ago
Bonface Munyoki 495712f5d0
gn: Add toolbar overlay for debugging genenetwork2 9 months ago
Bonface Munyoki 55e6f9dd0d
gn: Add python-flask-debugtoolbar. 9 months ago
Efraim Flashner fef68e9c57
gn: start moving calculated files to build separately 9 months ago
Efraim Flashner d7e42fd848
openssl-1.0 deprecated upstream, moved to guix-past 9 months ago
Efraim Flashner 5a810426d7
gn: genenetwork2: Don't hardcode python version. 10 months ago
Bonface Munyoki 9d62e687b3
gn: genenetwork: Remove "#:python ,python-wrapper" from "arguments" 10 months ago
Efraim Flashner b6761f9779 gn: Update gitea to 1.14.6. 10 months ago
Efraim Flashner ba96f981eb
gn: fix genenetwork2 package definition 10 months ago
Efraim Flashner 8ad9768e05
gn: Add pirs. 10 months ago
Efraim Flashner 08d32dfa56
gn: Add pbsim2. 10 months ago
Efraim Flashner 4de2b7e3fa
gn: Add pangenie. 10 months ago
Efraim Flashner ee9e292453
fixup genenetwork2 10 months ago
Efraim Flashner 4865664348
gn: Adjust genenetwork2 for removal of python2-genenetwork2 10 months ago
pjotrp f46cc3c4fb gemma.scm: muck out old stuff 10 months ago
pjotrp 3442513854 python2-genenetwork2: remove unused Python2 version of genenetwork 10 months ago
pjotrp cdf65fa27f shunit2: rename to shunit2-old, so as not to conflict with upstream 10 months ago
Bonface Munyoki 8fd543b687
gn: Update genenetwork3 to 0.0.1-guix-487e50e 10 months ago
Efraim Flashner 1430f96afe
gn: Upstream some rust crates 10 months ago
Bonface Munyoki c1e1bf49b9
gn: genenetwork3: Add csvdiff as a propagated input 10 months ago
Erik Garrison f7a739461e clarify that this is an old seqwish 10 months ago
Efraim Flashner 095e987300
gn: gfaffix: Don't hardcode rust-handlegraph package version 10 months ago
Efraim Flashner 20dd6613c8
gn: rust-handlegraph-0.7: Update to 0.7.0-alpha.9. 10 months ago
Erik Garrison b59473e017 actually update handlegraph 10 months ago
Erik Garrison 2fd5cecd21 get bugfix in rs-handlegraph 10 months ago
Efraim Flashner 4fc3b330b2
gn: code updates 10 months ago
Efraim Flashner 2e3c2a1df0
gn: Add gfaffix. 10 months ago
Efraim Flashner 84022eeab3
code updates 10 months ago
Efraim Flashner be9fca6a04
gn: Adjust python-whatshap for upstream changes 10 months ago
pjotrp a6b730ca2b ldc: build is fine; tests fail 10 months ago
Efraim Flashner e8274ba553
gn: Add python-whatshap 10 months ago
Bonface Munyoki c2c1a66502
gn: golang: Add csv fast diffing tool 10 months ago
Efraim Flashner 69223db92f
gn: Provide rtg.cfg for rtg-tools. 11 months ago
Efraim Flashner eecc939c49
gn: Add ccwl. 11 months ago
Bonface Munyoki 183b6e2ac2
gn: Update genenetwork3 to 0.0.1-guix-7d22039 11 months ago
Efraim Flashner 6b7394db63
gn: Add rtg-tools 11 months ago
Efraim Flashner ac3535858a
gn: Add python24-direct. 11 months ago
Pjotr Prins 8572fb7ffa gemma-wrapper: update to 0.99.1 11 months ago
Pjotr Prins c8004c68de gemma-wrapper: add GNU parallel 11 months ago
pjotrp e245ffdaf9 Added GNU parallel to genenetwork2 11 months ago