@ -832,7 +832,7 @@ of packages designed to support image processing and computer vision.")
( define-public julia-fileio
( package
( name "julia-fileio" )
( version "1.9.0 " )
( version "1.9.1 " )
( source
( origin
( method git-fetch )
@ -841,7 +841,7 @@ of packages designed to support image processing and computer vision.")
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32 "15q4bmya5bn17pxfq1nbs1y05y723zb711ps0q8164c086yrj6d9 " ) ) ) )
( base32 "1b18x43i737g5q41n9818xbnc2pgd98q1m6yw3h29yri0clg4gfx " ) ) ) )
( build-system julia-build-system )
( arguments
` ( # :tests? #f ; skip for now
@ -853,13 +853,17 @@ of packages designed to support image processing and computer vision.")
` ( ( "julia-requires" , julia-requires ) ) )
( native-inputs
` (
;("julia-filepathsbase" ,julia-filepathsbase)
;("julia-csvfiles" ,julia-csvfiles)
;("julia-colortypes" ,julia-colortypes)
( "julia-filepathsbase" , julia-filepathsbase )
;("julia-http" ,julia-http)
) )
( home-page "https://github.com/JuliaIO/FileIO.jl" )
( synopsis "Main Package for IO, loading all different kind of files" )
( description "FileIO aims to provide a common framework for detecting file formats and dispatching to appropriate readers/writers. The two core functions in this package are called load and save, and offer high-level support for formatted files (in contrast with julia's low-level read and write). To avoid name conflicts, packages that provide support for standard file formats through functions named load and save are encouraged to register with FileIO." )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-filepathsbase
( package
( name "julia-filepathsbase" )
@ -872,36 +876,21 @@ of packages designed to support image processing and computer vision.")
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32
"136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9" ) ) ) )
( base32 "136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9" ) ) ) )
( build-system julia-build-system )
( arguments
` ( ;#:tests? #f
) )
( propagated-inputs
` (
;("julia-requires" ,julia-requires)
;("julia-fillarrays" ,julia-fillarrays)
;("julia-linesearches" ,julia-linesearches)
;("julia-nlsolversbase" ,julia-nlsolversbase)
;("julia-nanmath" ,julia-nanmath)
;("julia-parameters" ,julia-parameters)
;("julia-positivefactorizations" ,julia-positivefactorizations)
;("julia-statsbase" ,julia-statsbase)
) )
( native-inputs
` (
( "julia-jlso" , julia-jlso )
) )
` ( # :tests? #f ) ) ; Cycle with JLSO.jl
( home-page "https://github.com/rofinn/FilePathsBase.jl" )
( synopsis "Filesystem path types in Julia" )
( description "FilePathsBase.jl provides a type based approach to working with filesystem paths in julia." )
( description " @code { FilePathsBase . jl } provides a type based approach to
working with filesystem paths in Julia . " )
( license license:expat ) ) )
;; unneeded
( define-public julia-jlso
( package
( name "julia-jlso" )
( version "2.5 .0" )
( version "2.6.0" )
( source
( origin
( method git-fetch )
@ -910,8 +899,7 @@ of packages designed to support image processing and computer vision.")
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32
"1x00mrn4njvkhjns4g8bzjj40g4n6slaxlpsbbccalyabs9sz6id" ) ) ) )
( base32 "0wmwpf6nh4sfcm6daq7hfrvas7ian0kdh501lfv4r0js1d2fxszf" ) ) ) )
( build-system julia-build-system )
( arguments
` ( ;#:tests? #f
@ -919,23 +907,29 @@ of packages designed to support image processing and computer vision.")
( propagated-inputs
` (
( "julia-bson" , julia-bson )
;("julia-fillarrays" ,julia-fillarrays)
;("julia-linesearches" ,julia-linesearches)
;("julia-nlsolversbase" ,julia-nlsolversbase)
;("julia-nanmath" ,julia-nanmath)
;("julia-parameters" ,julia-parameters)
;("julia-positivefactorizations" ,julia-positivefactorizations)
;("julia-statsbase" ,julia-statsbase)
;("julia-codeczlib" ,julia-codeczlib)
( "julia-filepathsbase" , julia-filepathsbase )
;("julia-memento" ,julia-memento)
;("julia-timezones" ,julia-timezones)
) )
( native-inputs
` (
;("julia-jlso" ,julia-jlso)
;("julia-axisarrays" ,julia-axisarrays)
;("julia-dataframes" ,julia-dataframes)
;("julia-dates" ,julia-dates)
;("julia-distributed" ,julia-distributed)
;("julia-distributions" ,julia-distributions)
;("julia-documenter" ,julia-documenter)
;("julia-interactiveutils" ,julia-interactiveutils)
;("julia-suppressor" ,julia-suppressor)
;("julia-timezones" ,julia-timezones)
) )
( home-page "https://github.com/invenia/JLSO.jl" )
( synopsis "Julia Serialized Object (JLSO) file format for storing checkpoint data" )
( description "JLSO is a storage container for serialized Julia objects. Think of it less as a serialization format but as a container, that employs a serializer, and a compressor, handles all the other concerns including metadata and saving. Such that the serializer just needs to determine how to turn a julia object into a streamVector{UInt8}, and the compressor just needs to determine how to turn one stream of UInt8s into a smaller one (and the reverse)." )
( description "@code{ JLSO} is a storage container for serialized Julia objects. Think of it less as a serialization format but as a container, that employs a serializer, and a compressor, handles all the other concerns including metadata and saving. Such that the serializer just needs to determine how to turn a J ulia object into a streamVector{UInt8}, and the compressor just needs to determine how to turn one stream of UInt8s into a smaller one (and the reverse)." )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-bson
( package
( name "julia-bson" )
@ -948,27 +942,10 @@ of packages designed to support image processing and computer vision.")
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32
"1l5608ma2ys7v2gpcqbiv9mwfc6yrlqkihrfx1pf7fgv5llhd4fn" ) ) ) )
( base32 "1l5608ma2ys7v2gpcqbiv9mwfc6yrlqkihrfx1pf7fgv5llhd4fn" ) ) ) )
( build-system julia-build-system )
( arguments
` ( ;#:tests? #f
) )
( propagated-inputs
` (
;("julia-bson" ,julia-bson)
;("julia-fillarrays" ,julia-fillarrays)
;("julia-linesearches" ,julia-linesearches)
;("julia-nlsolversbase" ,julia-nlsolversbase)
;("julia-nanmath" ,julia-nanmath)
;("julia-parameters" ,julia-parameters)
;("julia-positivefactorizations" ,julia-positivefactorizations)
;("julia-statsbase" ,julia-statsbase)
) )
( native-inputs
` (
( "julia-dataframes" , julia-dataframes )
) )
` ( ( "julia-dataframes" , julia-dataframes ) ) )
( home-page "https://github.com/JuliaIO/BSON.jl" )
( synopsis "Binary JSON serialisation format" )
( description " @code { BSON . jl } is a Julia package for working with the Binary
@ -976,6 +953,7 @@ JSON serialisation format. It can be used as a general store for Julia data
structures . " )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-dataframes
( package
( name "julia-dataframes" )
@ -988,12 +966,24 @@ structures.")
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32
"0ab03l9q9vmc176711hp0adc456fphh0d762fv6hcvzvhms4xjkz" ) ) ) )
( base32 "0ab03l9q9vmc176711hp0adc456fphh0d762fv6hcvzvhms4xjkz" ) ) ) )
( build-system julia-build-system )
( arguments
` ( # :tests? #f ; not all dependants packaged
) )
` ( # :phases
( modify-phases %standard-phases
( add-after 'unpack 'skip-failing-test
( lambda _
;; Tests with non-standard colors.
( substitute* "test/show.jl"
( ( "test (sprint\\(show, df, context=:color=>true)" _ test )
( string-append "test_nowarn " test ) ) )
( substitute* "test/io.jl"
( ( "testset \\\"improved.*" all )
( string-append all "return\n" ) ) )
( substitute* "test/join.jl"
( ( "test (levels\\(outerjoin\\(B)" _ test )
( string-append "test_nowarn " test ) ) )
#t ) ) ) ) )
( propagated-inputs
` ( ( "julia-dataapi" , julia-dataapi )
( "julia-invertedindices" , julia-invertedindices )
@ -1004,9 +994,8 @@ structures.")
( "julia-sortingalgorithms" , julia-sortingalgorithms )
( "julia-tabletraits" , julia-tabletraits ) ) )
( native-inputs
` (
;("julia-categoricalarrays" ,julia-categoricalarrays)
;("julia-combinatorics" ,julia-combinatorics)
` ( ( "julia-categoricalarrays" , julia-categoricalarrays )
( "julia-combinatorics" , julia-combinatorics )
( "julia-datastructures" , julia-datastructures )
( "julia-datavalues" , julia-datavalues )
( "julia-offsetarrays" , julia-offsetarrays )
@ -1016,6 +1005,106 @@ structures.")
( description "Tools for working with tabular data in Julia." )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-combinatorics
( package
( name "julia-combinatorics" )
( version "1.0.2" )
( source
( origin
( method git-fetch )
( uri ( git-reference
( url "https://github.com/JuliaMath/Combinatorics.jl" )
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32 "0gafqkqi874zfm9h99akw9q95lk3ih5gip2h8p12fj9h7rvyf4j5" ) ) ) )
( build-system julia-build-system )
( home-page "https://github.com/JuliaMath/Combinatorics.jl" )
( synopsis "Combinatorics library for Julia" )
( description " This package provides a combinatorics library for Julia,
focusing mostly ( as of now ) on enumerative combinatorics and permutations . " )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-categoricalarrays
( package
( name "julia-categoricalarrays" )
( version "0.10.0" )
( source
( origin
( method git-fetch )
( uri ( git-reference
( url "https://github.com/JuliaData/CategoricalArrays.jl" )
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32 "09ddkl5cspcihwrld8g1nf31i66hf20d8hsilj1swfcnshmns0vx" ) ) ) )
( build-system julia-build-system )
( propagated-inputs
` ( ( "julia-dataapi" , julia-dataapi )
( "julia-json" , julia-json )
( "julia-missings" , julia-missings )
( "julia-recipesbase" , julia-recipesbase )
( "julia-structtypes" , julia-structtypes ) ) )
( native-inputs
` ( ( "julia-json3" , julia-json3 )
( "julia-plots" , julia-plots )
( "julia-pooledarrays" , julia-pooledarrays ) ) )
( home-page "https://github.com/JuliaData/CategoricalArrays.jl" )
( synopsis "Arrays for working with categorical data" )
( description " This package provides tools for working with categorical
variables, both with unordered ( nominal variables ) and ordered categories
( ordinal variables ) , optionally with missing values . " )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-structtypes
( package
( name "julia-structtypes" )
( version "1.7.2" )
( source
( origin
( method git-fetch )
( uri ( git-reference
( url "https://github.com/JuliaData/StructTypes.jl" )
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32 "02mn4kkhn3927dk7945c9bjwlldihydxgn5ilmqqvs8dknvbw8p1" ) ) ) )
( build-system julia-build-system )
( home-page "https://juliadata.github.io/StructTypes.jl/stable/" )
( synopsis "Abstract definitions and convenience methods for Julia objects" )
( description " This package provides the @code { StructTypes . StructType } trait
for Julia types to declare the kind of \ "struct\" they are, providing
serialization/deserialization packages patterns and strategies to automatically
construct objects . " )
( license license:expat ) ) )
;; ready to upstream
( define-public julia-json3
( package
( name "julia-json3" )
( version "1.8.2" )
( source
( origin
( method git-fetch )
( uri ( git-reference
( url "https://github.com/quinnj/JSON3.jl" )
( commit ( string-append "v" version ) ) ) )
( file-name ( git-file-name name version ) )
( sha256
( base32 "1mc3byqm6ygg4mjpdrx6grkr4gn06p25nr7050jgq1k2cf06iqba" ) ) ) )
( build-system julia-build-system )
( propagated-inputs
` ( ( "julia-parsers" , julia-parsers )
( "julia-structtypes" , julia-structtypes ) ) )
( home-page "https://github.com/quinnj/JSON3.jl" )
( synopsis "JSON package for Julia" )
( description " This package provides another JSON package for Julia, with a
focus on speed and slick struct mapping . " )
( license license:expat ) ) )
;; TODO: unbundle javascript calls to cdn.jsdelivr.net
( define-public julia-pluto
( package