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gn: rust-handlegraph-0.7: Update to 0.7.0-alpha.9.

wip-tensorflow
Efraim Flashner 11 months ago
parent
commit
20dd6613c8
Signed by: efraim GPG Key ID: 41AAE7DCCA3D8351
  1. 3
      gn/packages/bioinformatics.scm
  2. 59
      gn/packages/crates-io.scm

3
gn/packages/bioinformatics.scm

@ -490,9 +490,6 @@ reads.")
(("\"0.7\"")
"{ version = \"0.7.0-alpha.9\" }"))
#t)))))
(inputs
;; rust-handlegraph@0.7 doesn't get picked up as a rust input.
`(("rust-handlegraph-0.7" ,rust-handlegraph-0.7)))
(home-page "https://github.com/marschall-lab/GFAffix")
(synopsis "Identify walk-preserving shared affixes in variation graphs")
(description

59
gn/packages/crates-io.scm

@ -75,37 +75,34 @@
(license license:expat)))
(define-public rust-handlegraph-0.7
;; After this commit try the next actual release.
(let ((commit "a7ca8da640ae442ffd3ef4f5f9f358cd37c7deee")
(revision "1"))
(package
(inherit rust-handlegraph-0.3)
(name "rust-handlegraph")
(version (git-version "0.7.0-alpha.9" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/chfi/rs-handlegraph")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "19cxgysxam79k6skanh4q4hafi4aglzcmg5hmm3vfnrzbz9q6js0"))))
(arguments
`(#:rust ,rust-1.47 ; or later
#:cargo-inputs
(("rust-anyhow" ,rust-anyhow-1)
("rust-boomphf" ,rust-boomphf-0.5)
("rust-bstr" ,rust-bstr-0.2)
("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5)
("rust-fnv" ,rust-fnv-1)
("rust-gfa" ,rust-gfa-0.10)
("rust-log" ,rust-log-0.4)
("rust-rayon" ,rust-rayon-1)
("rust-succinct" ,rust-succinct-0.5))
#:cargo-development-inputs
(("rust-quickcheck" ,rust-quickcheck-0.9)
("rust-rand" ,rust-rand-0.7)))))))
(package
(inherit rust-handlegraph-0.3)
(name "rust-handlegraph")
(version "0.7.0-alpha.9")
(source
(origin
(method url-fetch)
(uri (crate-uri "handlegraph" version))
(file-name
(string-append name "-" version ".tar.gz"))
(sha256
(base32
"1frlcdwhycjvizb0gfb0v36vxjdi0jxagl2l2v6dzdjxpaawv9rs"))))
(arguments
`(#:rust ,rust-1.47 ; or later
#:cargo-inputs
(("rust-anyhow" ,rust-anyhow-1)
("rust-boomphf" ,rust-boomphf-0.5)
("rust-bstr" ,rust-bstr-0.2)
("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5)
("rust-fnv" ,rust-fnv-1)
("rust-gfa" ,rust-gfa-0.10)
("rust-log" ,rust-log-0.4)
("rust-rayon" ,rust-rayon-1)
("rust-succinct" ,rust-succinct-0.5))
#:cargo-development-inputs
(("rust-quickcheck" ,rust-quickcheck-0.9)
("rust-rand" ,rust-rand-0.7))))))
(define-public rust-quick-csv-0.1
(package

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