Browse Source

gn: Add pbsim2.

wip-tensorflow
Efraim Flashner 11 months ago
parent
commit
08d32dfa56
Signed by: efraim GPG Key ID: 41AAE7DCCA3D8351
  1. 22
      gn/packages/bioinformatics.scm

22
gn/packages/bioinformatics.scm

@ -545,6 +545,28 @@ can be found @url{https://www.biorxiv.org/content/10.1101/2020.11.11.378133v1,
here}.")
(license license:expat))))
(define-public pbsim2
(let ((commit "e71f7892aea0bd3c963b4f1f5628db4f830ee475") ; Dec 2, 2020
(revision "1"))
(package
(name "pbsim2")
(version (git-version "0.0.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/yukiteruono/pbsim2")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "13d3mhdp3rs58w14j9a5sbda4q8k9vzic7rgfa8223m7cm5ih6y7"))))
(build-system gnu-build-system)
(home-page "https://github.com/yukiteruono/pbsim2")
(synopsis "Simulator for long read sequencers")
(description "PBSIM simulates @acronym{Continuous Long Reads, CLRs} of
PacBio, and Nanopore reads. In it sampling-based and model-based simulations
are implemented.")
(license license:gpl2))))
;; TODO: Unbundle zlib, bamtools, tclap
(define-public sniffles
(package

Loading…
Cancel
Save