{%extends "base.html"%} {%from "flash_messages.html" import flash_messages%} {%block title%}Data Upload{%endblock%} {%block contents%} <h1 class="heading">R/qtl2 data upload</h1> <h2>R/qtl2 Upload</h2> <div class="row"> <form method="POST" action="{{url_for('expression-data.rqtl2.select_species')}}" id="frm-rqtl2-upload"> <legend class="heading">upload R/qtl2 bundle</legend> {{flash_messages("error-rqtl2")}} <div class="form-group"> <label for="select:species" class="form-label">Species</label> <select id="select:species" name="species_id" required="required" class="form-control"> <option value="">Select species</option> {%for spec in species%} <option value="{{spec.SpeciesId}}">{{spec.MenuName}}</option> {%endfor%} </select> <small class="form-text text-muted"> Data that you upload to the system should belong to a know species. Here you can select the species that you wish to upload data for. </small> </div> <input type="submit" class="btn btn-primary" value="submit" /> </form> </div> <div class="row"> <h2 class="heading">R/qtl2 Bundles</h2> <div class="explainer"> <p>This feature combines and extends the two upload methods below. Instead of uploading one item at a time, the R/qtl2 bundle you upload can contain both the genotypes data (samples/individuals/cases and their data) and the expression data.</p> <p>The R/qtl2 bundle, additionally, can contain extra metadata, that neither of the methods below can handle.</p> <a href="{{url_for('expression-data.rqtl2.select_species')}}" title="Upload a zip bundle of R/qtl2 files"> <button class="btn btn-primary">upload R/qtl2 bundle</button></a> </div> </div> {%endblock%}