{%extends "platforms/base.html"%}
{%from "flash_messages.html" import flash_all_messages%}
{%from "species/macro-display-species-card.html" import display_species_card%}

{%block title%}Platforms — List Platforms{%endblock%}

{%block pagetitle%}Platforms — List Platforms{%endblock%}


{%block contents%}
{{flash_all_messages()}}

<div class="row">
  <p>View the list of the genetic sequencing platforms that are currently
    supported by GeneNetwork.</p>
  <p>If you cannot find the platform you wish to use, you can add it by clicking
    the "New Platform" button below.</p>
  <p><a href="{{url_for('species.platforms.create_platform',
              species_id=species.SpeciesId)}}"
        title="Create a new genetic sequencing platform for species {{species.FullName}}"
        class="btn btn-primary">Create Platform</a></p>
</div>

<div class="row">
  <h2>Supported Platforms</h2>
  {%if platforms is defined and platforms | length > 0%}
  <p>There are {{total_platforms}} platforms supported by GeneNetwork</p>

  <div class="row">
    <div class="col-md-2" style="text-align: start;">
      {%if start_from > 0%}
      <a href="{{url_for('species.platforms.list_platforms',
               species_id=species.SpeciesId,
               start_from=start_from-count,
               count=count)}}">
        <span class="glyphicon glyphicon-backward"></span>
        Previous
      </a>
      {%endif%}
    </div>
    <div class="col-md-8" style="text-align: center;">
      Displaying platforms {{start_from+1}} to {{start_from+count if start_from+count < total_platforms else total_platforms}} of
      {{total_platforms}}
    </div>
    <div class="col-md-2" style="text-align: end;">
      {%if start_from + count < total_platforms%}
      <a href="{{url_for('species.platforms.list_platforms',
               species_id=species.SpeciesId,
               start_from=start_from+count,
               count=count)}}">
        Next
        <span class="glyphicon glyphicon-forward"></span>
      </a>
      {%endif%}
    </div>
  </div>

  <table class="table">
    <thead>
      <tr>
        <th>#</th>
        <th>Platform Name</th>
        <th><a href="https://www.ncbi.nlm.nih.gov/geo/browse/?view=platforms&tax={{species.TaxonomyId}}"
               title="Gene Expression Omnibus: Platforms section"
               target="_blank">GEO Platform</a></th>
        <th>Title</th>
      </tr>
    </thead>

    <tbody>
      {%for platform in platforms%}
      <tr>
        <td>{{platform.sequence_number}}</td>
        <td>{{platform.GeneChipName}}</td>
        <td><a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc={{platform.GeoPlatform}}"
               title="View platform on the Gene Expression Omnibus"
               target="_blank">{{platform.GeoPlatform}}</a></td>
        <td>{{platform.Title}}</td>
      </tr>
      {%endfor%}
    </tbody>
  </table>
  {%else%}
  <p class="text-warning">
    <span class="glyphicon glyphicon-exclamation-sign"></span>
    There are no platforms supported at this time!</p>
  {%endif%}
</div>
{%endblock%}

{%block sidebarcontents%}
{{display_species_card(species)}}
{%endblock%}