"""Test loading of sex information.""" from pathlib import Path import pytest from zipfile import ZipFile from r_qtl import r_qtl2 as rqtl2 @pytest.mark.unit_test @pytest.mark.parametrize( "filepath,expected", (("tests/r_qtl/test_files/test_sex_info_01.zip", ({"id": "1", "sex": "male"}, {"id": "2", "sex": "male"}, {"id": "3", "sex": "male"}, {"id": "71", "sex": "male"}, {"id": "72", "sex": "male"}, {"id": "146", "sex": "female"}, {"id": "147", "sex": "female"}, {"id": "148", "sex": "female"})), ("tests/r_qtl/test_files/test_sex_info_02.zip", ({"id": "1", "sex": "male"}, {"id": "2", "sex": "male"}, {"id": "3", "sex": "male"}, {"id": "71", "sex": "male"}, {"id": "72", "sex": "male"}, {"id": "146", "sex": "female"}, {"id": "147", "sex": "female"}, {"id": "148", "sex": "female"})))) def test_parse_sex_info(filepath, expected): """Test parsing of sex information.""" with ZipFile(Path(filepath).absolute(), "r") as zfile: assert tuple(rqtl2.sex_information( zfile, rqtl2.control_data(zfile))) == expected