{%extends "base.html"%} {%block title%}Data Review{%endblock%} {%block contents%}

data review

Data Concerns

The following are some of the requirements that the data in your file MUST fulfil before it is considered valid for this system:

  1. File headings
    • The first row in the file should contains the headings. The number of headings in this first row determines the number of columns expected for all other lines in the file.
    • Each heading value in the first row MUST appear in the first row ONE AND ONLY ONE time
    • The sample/cases (previously 'strains') headers in your first row will be against those in the GeneNetwork database.
      If you encounter an error saying your sample(s)/case(s) do not exist in the GeneNetwork database, then you will have to use the Upload Samples/Cases option on this system to upload them.
  2. Data
    1. NONE of the data cells/fields is allowed to be empty. All fields/cells MUST contain a value.
    2. The first column of the data rows will be considered a textual field, holding the "identifier" for that row
    3. Except for the first column/field for each data row, NONE of the data columns/cells/fields should contain spurious characters like `eeeee`, `5.555iloveguix`, etc...
      All of them should be decimal values
    4. decimal numbers must conform to the following criteria:
      • when checking an average file decimal numbers must have exactly three decimal places to the right of the decimal point.
      • when checking a standard error file decimal numbers must have six or greater decimal places to the right of the decimal point.
      • there must be a number to the left side of the decimal place (e.g. 0.55555 is allowed but .55555 is not).

Supported File Types

We support the following file types:
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