From a7f4c053122a534218943ea778d875d3c1cc3ee6 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Thu, 23 Jan 2025 15:41:03 -0600
Subject: Add publication data to page.

---
 uploader/phenotypes/views.py                      | 11 ++++++++++-
 uploader/templates/phenotypes/view-phenotype.html | 13 +++++++++++++
 2 files changed, 23 insertions(+), 1 deletion(-)

(limited to 'uploader')

diff --git a/uploader/phenotypes/views.py b/uploader/phenotypes/views.py
index 9c5c71a..8ecd305 100644
--- a/uploader/phenotypes/views.py
+++ b/uploader/phenotypes/views.py
@@ -44,7 +44,8 @@ from .models import (dataset_by_id,
                      phenotypes_count,
                      save_new_dataset,
                      dataset_phenotypes,
-                     datasets_by_population)
+                     datasets_by_population,
+                     phenotype_publication_data)
 
 phenotypesbp = Blueprint("phenotypes", __name__)
 render_template = make_template_renderer("phenotypes")
@@ -232,6 +233,14 @@ def view_phenotype(# pylint: disable=[unused-argument]
             dataset=dataset,
             phenotype=phenotype,
             has_se=all(bool(item.get("error")) for item in phenotype["data"]),
+            publish_data={
+                key.replace("_", " "): val
+                for key,val in
+                (phenotype_publication_data(conn, phenotype["Id"]) or {}).items()
+                if (key in ("PubMed_ID", "Authors", "Title", "Journal")
+                    and val is not None
+                    and val.strip() is not "")
+            },
             privileges=(privileges
                         ### For demo! Do not commit this part
                             + ("group:resource:edit-resource",
diff --git a/uploader/templates/phenotypes/view-phenotype.html b/uploader/templates/phenotypes/view-phenotype.html
index 5ed45b7..03f7ea0 100644
--- a/uploader/templates/phenotypes/view-phenotype.html
+++ b/uploader/templates/phenotypes/view-phenotype.html
@@ -45,6 +45,19 @@
           <td><strong>Units</strong></td>
           <td>{{phenotype.Units}}</td>
         </tr>
+        {%for key,value in publish_data.items()%}
+        <tr>
+          <td><strong>{{key}}</strong></td>
+          <td>{{value}}</td>
+        </tr>
+        {%else%}
+        <tr>
+          <td colspan="2" class="text-muted">
+            <span class="glyphicon glyphicon-exclamation-sign"></span>
+            No publication data found.
+          </td>
+        </tr>
+        {%endfor%}
       </tbody>
     </table>
 
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