From 7057f7ddd0c14790398f65ae7ca1acf10da5a52e Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 5 May 2025 11:51:25 -0500
Subject: Include the publication when provided.

---
 .../templates/phenotypes/add-phenotypes-raw-files.html    |  1 +
 uploader/templates/phenotypes/review-job-data.html        | 15 +++++++++++++--
 2 files changed, 14 insertions(+), 2 deletions(-)

(limited to 'uploader/templates')

diff --git a/uploader/templates/phenotypes/add-phenotypes-raw-files.html b/uploader/templates/phenotypes/add-phenotypes-raw-files.html
index 2ff6a4f..5709491 100644
--- a/uploader/templates/phenotypes/add-phenotypes-raw-files.html
+++ b/uploader/templates/phenotypes/add-phenotypes-raw-files.html
@@ -585,6 +585,7 @@
           }));
       });
       formdata.append("resumable-upload", "true");
+      formdata.append("publication-id", $("#txt-publication-id").val());
       return formdata;
   }
 
diff --git a/uploader/templates/phenotypes/review-job-data.html b/uploader/templates/phenotypes/review-job-data.html
index 7bc8c62..befb5e2 100644
--- a/uploader/templates/phenotypes/review-job-data.html
+++ b/uploader/templates/phenotypes/review-job-data.html
@@ -40,9 +40,20 @@
     species &#x201C;<strong>{{species.SpeciesName}} ({{species.FullName}})</strong>&#x201D;
     will be updated as follows:</p>
 
+  <ul>
+    {%if publication%}
+    <li>All {{summary.get("pheno", {}).get("total-data-rows", "0")}} phenotypes
+      are linked to the following publication:
+      <ul>
+        <li><strong>Publication Title:</strong>
+          {{publication.Title or "—"}}</li>
+        <li><strong>Author(s):</strong>
+          {{publication.Authors or "—"}}</li>
+      </ul>
+    </li>
+    {%endif%}
   {%for ftype in ("phenocovar", "pheno", "phenose", "phenonum")%}
   {%if summary.get(ftype, False)%}
-  <ul>
     <li>A total of {{summary[ftype]["number-of-files"]}} files will be processed
       adding {%if ftype == "phenocovar"%}(possibly){%endif%}
       {{summary[ftype]["total-data-rows"]}} new
@@ -53,9 +64,9 @@
       {%endif%}
       to the database.
     </li>
-  </ul>
   {%endif%}
   {%endfor%}
+  </ul>
 
   <a href="#" class="not-implemented btn btn-primary">continue</a>
 </div>
-- 
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