From 9cd33ddac3d6848c5443962d66494635feadef51 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 9 Sep 2024 14:06:31 -0500
Subject: Initialise samples uploads

* Move existing code to new module
* Rework the UI: create new templates
* Rework the routes: Select species and populations before attempting
  an upload.
---
 uploader/templates/samples/list-samples.html | 114 +++++++++++++++++++++++++++
 1 file changed, 114 insertions(+)
 create mode 100644 uploader/templates/samples/list-samples.html

(limited to 'uploader/templates/samples/list-samples.html')

diff --git a/uploader/templates/samples/list-samples.html b/uploader/templates/samples/list-samples.html
new file mode 100644
index 0000000..a29dc1c
--- /dev/null
+++ b/uploader/templates/samples/list-samples.html
@@ -0,0 +1,114 @@
+{%extends "samples/base.html"%}
+{%from "flash_messages.html" import flash_all_messages%}
+{%from "populations/macro-select-population.html" import select_population_form%}
+{%from "populations/macro-display-population-card.html" import display_population_card%}
+
+{%block title%}Samples — List Samples{%endblock%}
+
+{%block pagetitle%}Samples — List Samples{%endblock%}
+
+{%block lvl4_breadcrumbs%}
+<li {%if activelink=="list-samples"%}
+    class="breadcrumb-item active"
+    {%else%}
+    class="breadcrumb-item"
+    {%endif%}>
+  <a href="{{url_for('species.populations.samples.list_samples',
+           species_id=species.SpeciesId,
+           population_id=population.Id)}}">List</a>
+</li>
+{%endblock%}
+
+{%block contents%}
+{{flash_all_messages()}}
+
+<div class="row">
+  <p>
+    Samples for population "{{population.FullName}}" from the
+    "{{species.FullName}}" species.
+  </p>
+
+  {%if samples | length > 0%}
+  <div class="row">
+    <div class="col-md-2">
+      {%if offset > 0:%}
+      <a href="{{url_for('species.populations.samples.list_samples',
+               species_id=species.SpeciesId,
+               population_id=population.Id,
+               from=offset-count,
+               count=count)}}">
+        <span class="glyphicon glyphicon-backward"></span>
+        Previous
+      </a>
+      {%endif%}
+    </div>
+
+    <div class="col-md-8" style="text-align: center;">
+      Samples {{offset}} &mdash; {{offset+(count if offset + count < total_samples else total_samples - offset)}} / {{total_samples}}
+    </div>
+
+    <div class="col-md-2">
+      {%if offset + count < total_samples:%}
+        <a href="{{url_for('species.populations.samples.list_samples',
+                 species_id=species.SpeciesId,
+                 population_id=population.Id,
+                 from=offset+count,
+                 count=count)}}">
+          Next
+          <span class="glyphicon glyphicon-forward"></span>
+        </a>
+        {%endif%}
+    </div>
+  </div>
+  <table class="table">
+    <thead>
+      <tr>
+        <th>Name</th>
+        <th>Auxilliary Name</th>
+        <th>Symbol</th>
+        <th>Alias</th>
+      </tr>
+    </thead>
+
+    <tbody>
+      {%for sample in samples%}
+      <tr>
+        <td>{{sample.Name}}</td>
+        <td>{{sample.Name2}}</td>
+        <td>{{sample.Symbol or "-"}}</td>
+        <td>{{sample.Alias or "-"}}</td>
+      </tr>
+      {%endfor%}
+    </tbody>
+  </table>
+
+  <p>
+    <a href="#"
+       title="Add samples for population '{{population.FullName}}' from species
+              '{{species.FullName}}'."
+       class="btn btn-danger">
+      delete all samples
+    </a>
+  </p>
+  {%else%}
+  <p class="text-danger">
+    <span class="glyphicon glyphicon-exclamation-sign"></span>
+    There are no samples for this population at this time.
+  </p>
+
+  <p>
+    <a href="#"
+       title="Add samples for population '{{population.FullName}}' from species
+              '{{species.FullName}}'."
+       class="btn btn-primary">
+      add samples
+    </a>
+  </p>
+  {%endif%}
+</div>
+{%endblock%}
+
+{%block sidebarcontents%}
+{{display_population_card(species, population)}}
+{%endblock%}
+
-- 
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