From b0991ec5cea1411237b82e92467603bf9da803f5 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Tue, 17 Jun 2025 14:18:24 -0500
Subject: Allow users to provide transposed files.

---
 .../phenotypes/add-phenotypes-raw-files.html       | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)

(limited to 'uploader/templates/phenotypes/add-phenotypes-raw-files.html')

diff --git a/uploader/templates/phenotypes/add-phenotypes-raw-files.html b/uploader/templates/phenotypes/add-phenotypes-raw-files.html
index 697c7ad..5c6aaab 100644
--- a/uploader/templates/phenotypes/add-phenotypes-raw-files.html
+++ b/uploader/templates/phenotypes/add-phenotypes-raw-files.html
@@ -103,6 +103,28 @@
       <a href="#docs-file-na" title="Documentation for no-value fields">
         documentation for more information</a>.</span>
   </div>
+
+  <div class="form-check form-group">
+    <div class="">
+      <input id="chk-file-transposed"
+             name="file-transposed"
+             type="checkbox"
+             class="form-check-input"
+             style="border: solid #8EABF0" />
+      <label for="chk-file-transposed" class="form-check-label">
+        File transposed</label>
+    </div>
+    <span class="form-text text-muted">
+      We expect the data in the file as a matrix of
+      <strong>samples × phenotypes</strong>, but it could be your file is
+      transposed, (i.e. it is a matrix of
+      &ldquo;<em>phenotypes × samples</em>&rdquo;, rather than the expected
+      form).
+      <br />
+      If that is the case for your files, mark your files as trasposed by
+      ensuring that this checkbox is checked.
+    </span>
+  </div>
 </fieldset>
 
 <fieldset id="fldset-data-files">
-- 
cgit 1.4.1