From b9490c4e26d97c1a569edbe99929bcf962d9df3b Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 14 Apr 2025 14:04:31 -0500
Subject: Move test to appropriate package.

---
 tests/uploader/phenotypes/test_misc.py | 67 ----------------------------------
 1 file changed, 67 deletions(-)
 delete mode 100644 tests/uploader/phenotypes/test_misc.py

(limited to 'tests/uploader/phenotypes')

diff --git a/tests/uploader/phenotypes/test_misc.py b/tests/uploader/phenotypes/test_misc.py
deleted file mode 100644
index 7a52941..0000000
--- a/tests/uploader/phenotypes/test_misc.py
+++ /dev/null
@@ -1,67 +0,0 @@
-"""Tests for functions used for bulk editing."""
-import pytest
-
-from uploader.publications.misc import publications_differences
-
-
-@pytest.mark.unit_test
-@pytest.mark.parametrize(
-    "filedata,dbdata,pubmed2pubidmap,expected",
-    (((), (), {}, tuple()), # no data
-
-     # Same Data
-     (({"phenotype_id": 1, "xref_id": 10001, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10002, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10003, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10005, "PubMed_ID": 9999999999999}),
-      ({"PhenotypeId": 1, "xref_id": 10001, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10002, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10003, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10004, "PublicationId": 15,
-        "PubMed_ID": 9999999999999}),
-      {9999999999999: 15},
-      tuple()),
-
-     # Differences: no new pubmeds (all pubmeds in db)
-     (({"phenotype_id": 1, "xref_id": 10001, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10002, "PubMed_ID": 9999999999998},
-       {"phenotype_id": 1, "xref_id": 10003, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10004, "PubMed_ID": 9999999999997}),
-      ({"PhenotypeId": 1, "xref_id": 10001, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10002, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10003, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10004, "PublicationId": 15,
-        "PubMed_ID": None}),
-      {9999999999999: 15, 9999999999998: 18, 9999999999997: 12},
-      ({"PhenotypeId": 1, "xref_id": 10002, "PublicationId": 18,
-          "PubMed_ID": 9999999999998},
-       {"PhenotypeId": 1, "xref_id": 10004, "PublicationId": 12,
-        "PubMed_ID": 9999999999997})),
-
-     # Differences: Deletions of pubmeds
-     (({"phenotype_id": 1, "xref_id": 10001, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10002, "PubMed_ID": None},
-       {"phenotype_id": 1, "xref_id": 10003, "PubMed_ID": 9999999999999},
-       {"phenotype_id": 1, "xref_id": 10004, "PubMed_ID": None}),
-      ({"PhenotypeId": 1, "xref_id": 10001, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10002, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10003, "PublicationId": 15,
-        "PubMed_ID": 9999999999999},
-       {"PhenotypeId": 1, "xref_id": 10004, "PublicationId": 15,
-        "PubMed_ID": 9999999999999}),
-      {9999999999999: 15, 9999999999998: 18, 9999999999997: 12},
-      ({"PhenotypeId": 1, "xref_id": 10002, "PublicationId": None,
-        "PubMed_ID": None},
-       {"PhenotypeId": 1, "xref_id": 10004, "PublicationId": None,
-        "PubMed_ID": None}))))
-def test_publications_differences(filedata, dbdata, pubmed2pubidmap, expected):
-    assert publications_differences(
-        filedata, dbdata, pubmed2pubidmap) == expected
-- 
cgit 1.4.1