From fcade690de59249a2789c26e8f668f36f8f4e075 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 2 May 2022 13:04:03 +0300
Subject: Optimise strain names parsing

- Use a way faster way of parsing the strains file
---
 scripts/qc.py | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

(limited to 'scripts')

diff --git a/scripts/qc.py b/scripts/qc.py
index 09758cb..9937e5b 100644
--- a/scripts/qc.py
+++ b/scripts/qc.py
@@ -10,8 +10,7 @@ from quality_control.parsing import (
     FileType,
     parse_file,
     strain_names,
-    parse_errors,
-    parse_strains)
+    parse_errors)
 
 
 def is_file_mime(filepath, mimetype):
@@ -93,7 +92,7 @@ def main():
     if args.verbose:
         print(f"Parsing the strain names from '{args.strainsfile}'")
 
-    strains = strain_names(parse_strains(os.path.realpath(args.strainsfile)))
+    strains = strain_names(os.path.realpath(args.strainsfile))
 
     filepath = os.path.realpath(args.filepath)
     if args.verbose:
-- 
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