From cfdc87755c1be7f9c5f0dbd4236679621e612d8f Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Thu, 24 Oct 2024 16:50:40 -0500
Subject: Add `jobid` to extraction directory

Add the job id to help "group" files that belong to the same job.
---
 scripts/rqtl2/phenotypes_qc.py | 7 +++++--
 1 file changed, 5 insertions(+), 2 deletions(-)

(limited to 'scripts')

diff --git a/scripts/rqtl2/phenotypes_qc.py b/scripts/rqtl2/phenotypes_qc.py
index d8bf3c2..2e7937f 100644
--- a/scripts/rqtl2/phenotypes_qc.py
+++ b/scripts/rqtl2/phenotypes_qc.py
@@ -1,5 +1,6 @@
 """Run quality control on phenotypes-specific files in the bundle."""
 import sys
+import uuid
 import shutil
 import logging
 import tempfile
@@ -111,11 +112,13 @@ def check_for_averages_files(
     }
 
 
-def extract_bundle(bundle: Path, workdir: Path) -> tuple[Path, tuple[Path, ...]]:
+def extract_bundle(
+        bundle: Path, workdir: Path, jobid: uuid.UUID
+) -> tuple[Path, tuple[Path, ...]]:
     """Extract the bundle."""
     with ZipFile(bundle) as zfile:
         extractiondir = workdir.joinpath(
-            f"{sha256_digest_over_file(bundle)}_phenotype_qc_{bundle.name}")
+            f"{str(jobid)}-{sha256_digest_over_file(bundle)}-{bundle.name}")
         return extractiondir, rqtl2.extract(zfile, extractiondir)
 
 
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