From 949ea71eb721a3f5bdff3ba10f7dd7c70899d560 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 5 Feb 2024 12:11:43 +0300
Subject: Fix linting and type errors.

---
 scripts/rqtl2/install_genotypes.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

(limited to 'scripts/rqtl2/install_genotypes.py')

diff --git a/scripts/rqtl2/install_genotypes.py b/scripts/rqtl2/install_genotypes.py
index bfe17b8..7f3f65a 100644
--- a/scripts/rqtl2/install_genotypes.py
+++ b/scripts/rqtl2/install_genotypes.py
@@ -11,6 +11,7 @@ import MySQLdb as mdb
 from MySQLdb.cursors import DictCursor
 
 from r_qtl import r_qtl2 as rqtl2
+from r_qtl import r_qtl2_qc as rqc
 
 from functional_tools import take
 
@@ -166,7 +167,7 @@ def install_genotypes(#pylint: disable=[too-many-arguments, too-many-locals]
     with ZipFile(str(rqtl2bundle.absolute()), "r") as zfile:
         try:
             logger.info("Validating bundle")
-            rqtl2.validate_bundle(zfile)
+            rqc.validate_bundle(zfile)
             logger.info("Bundle validated successfully.")
             logger.info(("Loading genotypes. This could take a while. "
                          "Please be patient."))
-- 
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