From 8a84c4d6762446e5fdf9f9121f539c89419ae6a0 Mon Sep 17 00:00:00 2001 From: Frederick Muriuki Muriithi Date: Fri, 22 Nov 2024 12:16:28 -0600 Subject: Use gn-libs code for db connection. Use the code in gn-libs to connect to the database, rather than a local module. --- scripts/qc.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'scripts/qc.py') diff --git a/scripts/qc.py b/scripts/qc.py index 6de051f..b00f4c1 100644 --- a/scripts/qc.py +++ b/scripts/qc.py @@ -5,14 +5,14 @@ import mimetypes from typing import Union, Callable from argparse import ArgumentParser +from gn_libs.mysqldb import database_connection + from functional_tools import take from quality_control.utils import make_progress_calculator from quality_control.errors import InvalidValue, DuplicateHeading from quality_control.parsing import FileType, strain_names, collect_errors -from uploader.db_utils import database_connection - from .cli_parser import init_cli_parser -- cgit 1.4.1