From 754e8f214b940e05298cb360ed829f5c685d55a5 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Thu, 25 Jul 2024 11:07:33 -0500
Subject: Rename module: qc_app --> uploader

---
 qc_app/templates/data_review.html | 85 ---------------------------------------
 1 file changed, 85 deletions(-)
 delete mode 100644 qc_app/templates/data_review.html

(limited to 'qc_app/templates/data_review.html')

diff --git a/qc_app/templates/data_review.html b/qc_app/templates/data_review.html
deleted file mode 100644
index b7528fd..0000000
--- a/qc_app/templates/data_review.html
+++ /dev/null
@@ -1,85 +0,0 @@
-{%extends "base.html"%}
-
-{%block title%}Data Review{%endblock%}
-
-{%block contents%}
-<h1 class="heading">data review</h1>
-
-<div class="row">
-  <h2 id="data-concerns">Data Concerns</h2>
-  <p>The following are some of the requirements that the data in your file
-    <strong>MUST</strong> fulfil before it is considered valid for this system:
-  </p>
-
-  <ol>
-    <li>File headings
-      <ul>
-	<li>The first row in the file should contains the headings. The number of
-	  headings in this first row determines the number of columns expected for
-	  all other lines in the file.</li>
-	<li>Each heading value in the first row MUST appear in the first row
-	  <strong>ONE AND ONLY ONE</strong> time</li>
-	<li>The sample/cases (previously 'strains') headers in your first row will be
-          against those in the <a href="https://genenetwork.org"
-                                  title="Link to the GeneNetwork service">
-            GeneNetwork</a> database.<br />
-          <small class="text-muted">
-            If you encounter an error saying your sample(s)/case(s) do not exist
-            in the GeneNetwork database, then you will have to use the
-            <a href="{{url_for('samples.select_species')}}"
-               title="Upload samples/cases feature">Upload Samples/Cases</a>
-            option on this system to upload them.
-          </small>
-      </ul>
-    </li>
-
-    <li>Data
-      <ol>
-	<li><strong>NONE</strong> of the data cells/fields is allowed to be empty.
-	  All fields/cells <strong>MUST</strong> contain a value.</li>
-	<li>The first column of the data rows will be considered a textual field,
-	  holding the "identifier" for that row<li>
-	<li>Except for the first column/field for each data row,
-	  <strong>NONE</strong> of the data columns/cells/fields should contain
-	  spurious characters like `eeeee`, `5.555iloveguix`, etc...<br />
-	  All of them should be decimal values</li>
-	<li>decimal numbers must conform to the following criteria:
-	  <ul>
-	    <li>when checking an average file decimal numbers must have exactly three
-	      decimal places to the right of the decimal point.</li>
-	    <li>when checking a standard error file decimal numbers must have six or
-	      greater decimal places to the right of the decimal point.</li>
-	    <li>there must be a number to the left side of the decimal place
-	      (e.g. 0.55555 is allowed but .55555 is not).</li>
-	  </ul>
-	</li>
-      </ol>
-    </li>
-  </ol>
-</div>
-
-
-<div class="row">
-  <h2 id="file-types">Supported File Types</h2>
-  We support the following file types:
-
-  <ul>
-    <li>Tab-Separated value files (.tsv)
-      <ul>
-	<li>The <strong>TAB</strong> character is used to separate the fields of each
-	  column</li>
-	<li>The values of each field <strong>ARE NOT</strong> quoted.</li>
-	<li>Here is an
-	  <a href="https://gitlab.com/fredmanglis/gnqc_py/-/blob/main/tests/test_data/no_data_errors.tsv">
-	    example file</a> with a single data row.</li>
-      </ul>
-    </li>
-    <li>.txt files: Content has the same format as .tsv file above</li>
-    <li>.zip files: each zip file should contain
-      <strong>ONE AND ONLY ONE</strong> file of the .tsv or .txt type above.
-      <br />Any zip file with more than one file is invalid, and so is an empty
-      zip file.</li>
-  </ul>
-
-</div>
-{%endblock%}
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