From 23a5e2c8dc2cbbf1ce55c22f80519824e413b883 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Thu, 7 Jul 2022 09:24:29 +0300
Subject: Provide selection for GeneChips

The GeneChipId value is required for the data being inserted, so this
commit provides the UI to enable selection of the chip.
---
 qc_app/static/css/styles.css | 27 ++++++++++++----------
 qc_app/static/js/dbinsert.js | 55 ++++++++++++++++++++++++++++++++++++++++++--
 2 files changed, 68 insertions(+), 14 deletions(-)

(limited to 'qc_app/static')

diff --git a/qc_app/static/css/styles.css b/qc_app/static/css/styles.css
index 4d0fa8c..922924c 100644
--- a/qc_app/static/css/styles.css
+++ b/qc_app/static/css/styles.css
@@ -1,3 +1,7 @@
+* {
+    box-sizing: border-box;
+}
+
 label, legend {
     text-transform: capitalize;
 }
@@ -57,14 +61,11 @@ fieldset {
 
 table {
     border-collapse: collapse;
-}
-
-.reports-table {
     border: 1px solid;
     border-color: #336699;
 }
 
-.reports-table thead {
+table thead {
     color: #FEFEFE;
     background-color: #336699;
     border-width: 0 1px 0 1px;
@@ -72,12 +73,12 @@ table {
     border-color:  #336699;
 }
 
-.reports-table thead tr th {
+table thead tr th {
     text-transform: capitalize;
 }
 
-.reports-table th,td {
-    border-width: 0 1px 0 1px;
+table th,td {
+    border-width: 0 1px 1px 1px;
     border-style: solid;
     border-color:  #336699;
     padding: 0 0.3em 0.3em 0.3em;
@@ -102,10 +103,6 @@ table {
     border-radius: 1em;
 }
 
-form {
-    width: 30%;
-}
-
 fieldset {
     border-style: none;
     display: grid;
@@ -117,6 +114,12 @@ label {
     grid-column: 1 / 2;
 }
 
-input,select,button {
+fieldset input,select,button {
     grid-column: 2 / 3;
+    width: 20%;
+}
+
+input[disabled="true"],input[disabled="disabled"] {
+    border-color: #878787;
+    background-color: #A9A9A9;
 }
diff --git a/qc_app/static/js/dbinsert.js b/qc_app/static/js/dbinsert.js
index 3c0be54..63d2c86 100644
--- a/qc_app/static/js/dbinsert.js
+++ b/qc_app/static/js/dbinsert.js
@@ -62,7 +62,6 @@ function setup_types(type_data) {
 }
 
 function setup_datasets(dataset_data) {
-    console.info("DATASET DATA:", dataset_data);
     elt = document.getElementById("dataset");
     remove_children(elt);
     dataset_data.forEach(dataset => {
@@ -75,14 +74,65 @@ function setup_datasets(dataset_data) {
     trigger_change_event(elt);
 }
 
+function radio_column(chip) {
+    col = document.createElement("td");
+    radio = document.createElement("input");
+    radio.setAttribute("type", "radio");
+    radio.setAttribute("name", "genechipid");
+    radio.setAttribute("value", chip["GeneChipId"]);
+    radio.setAttribute("required", "required");
+    col.appendChild(radio);
+    return col;
+}
+
+function setup_genechips(genechip_data) {
+    columns = ["GeneChipName", "Name", "GeoPlatform", "GO_tree_value"]
+    submit_button = document.querySelector(
+	"#select-dataset-form input[type='submit']");
+    elt = document.getElementById(
+	"genechips-table").getElementsByTagName("tbody")[0];
+    remove_children(elt);
+    if((genechip_data === undefined) || genechip_data.length === 0) {
+	row = document.createElement("tr");
+	col = document.createElement("td");
+	col.setAttribute("colspan", "5");
+	text = document.createTextNode("No chips found for selected species");
+	col.appendChild(text);
+	row.appendChild(col);
+	elt.appendChild(row);
+	submit_button.setAttribute("disabled", true);
+	return false;
+    }
+
+    submit_button.removeAttribute("disabled")
+    genechip_data.forEach(chip => {
+	row = document.createElement("tr");
+	row.appendChild(radio_column(chip));
+	columns.forEach(column => {
+	    col = document.createElement("td");
+	    content = document.createTextNode(chip[column]);
+	    col.appendChild(content);
+	    row.appendChild(col);
+	});
+	elt.appendChild(row);
+    });
+}
+
 function menu_contents() {
     return JSON.parse(
-	document.getElementsByTagName("form")[0].getAttribute(
+	document.getElementById("select-dataset-form").getAttribute(
 	    "data-menu-content"));
 }
 
+function genechips() {
+    return JSON.parse(
+	document.getElementById("select-dataset-form").getAttribute(
+	    "data-genechips"));
+}
+
 function update_menu(event) {
     menu = menu_contents();
+    genec = genechips();
 
     species_elt = document.getElementById("species");
     group_elt = document.getElementById("group");
@@ -91,6 +141,7 @@ function update_menu(event) {
 
     if(event.target == species_elt) {
 	setup_groups(menu["groups"][species_elt.value]);
+	setup_genechips(genec[species_elt.value.toLowerCase()]);
     }
 
     if(event.target == group_elt) {
-- 
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