From f22c423375487149f4f485d83c4a083f3ca0dbfd Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Tue, 19 Mar 2024 15:13:15 +0300
Subject: Add debugging statements to track upload of R/qtl2 bundle.

---
 qc_app/upload/rqtl2.py | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/qc_app/upload/rqtl2.py b/qc_app/upload/rqtl2.py
index d42780f..c05f675 100644
--- a/qc_app/upload/rqtl2.py
+++ b/qc_app/upload/rqtl2.py
@@ -1,6 +1,7 @@
 """Module to handle uploading of R/qtl2 bundles."""
 import sys
 import json
+import traceback
 from pathlib import Path
 from datetime import date
 from uuid import UUID, uuid4
@@ -156,9 +157,11 @@ def upload_rqtl2_bundle(species_id: int, population_id: int):
                                    population=population)
 
         try:
+            app.logger.debug("Files in the form: %s", request.files)
             the_file = save_file(request.files["rqtl2_bundle_file"],
                                  Path(app.config["UPLOAD_FOLDER"]))
         except AssertionError:
+            app.logger.debug(traceback.format_exc())
             flash("Please provide a valid R/qtl2 zip bundle.",
                   "alert-error error-rqtl2")
             return redirect(url_for("upload.rqtl2.upload_rqtl2_bundle",
@@ -166,6 +169,7 @@ def upload_rqtl2_bundle(species_id: int, population_id: int):
                                     population_id=population_id))
 
         if not is_zipfile(str(the_file)):
+            app.logger.debug("The file is not a zip file.")
             raise __RequestError__("Invalid file! Expected a zip file.")
 
         redisuri = app.config["REDIS_URL"]
-- 
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