From 27586a821f47a6e7aa3e77df9b98686d68a121e5 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 29 Dec 2025 12:10:14 -0600
Subject: Genotypes: Move feature to new UI templates.

---
 uploader/templates/genotypes/base.html           | 31 ++++++++++--------------
 uploader/templates/genotypes/list-genotypes.html | 17 -------------
 uploader/templates/genotypes/list-markers.html   | 20 ++++++---------
 uploader/templates/genotypes/view-dataset.html   | 16 +++---------
 4 files changed, 24 insertions(+), 60 deletions(-)

diff --git a/uploader/templates/genotypes/base.html b/uploader/templates/genotypes/base.html
index 7d61312..8d1b951 100644
--- a/uploader/templates/genotypes/base.html
+++ b/uploader/templates/genotypes/base.html
@@ -1,23 +1,18 @@
 {%extends "populations/base.html"%}
+{%from "populations/macro-display-population-card.html" import display_sui_population_card%}
 
-{%block lvl3_breadcrumbs%}
-<li {%if activelink=="genotypes"%}
-    class="breadcrumb-item active"
-    {%else%}
-    class="breadcrumb-item"
-    {%endif%}>
-  {%if population is mapping%}
+{%block breadcrumbs%}
+{{super()}}
+<li class="breadcrumb-item">
   <a href="{{url_for('species.populations.genotypes.list_genotypes',
-           species_id=species.SpeciesId,
-           population_id=population.Id)}}">
-    {%if dataset is defined and dataset is mapping%}
-    {{dataset.Name}}
-    {%else%}
-    Genotypes
-    {%endif%}</a>
-  {%else%}
-  <a href="{{url_for('species.populations.genotypes.index')}}">Genotypes</a>
-  {%endif%}
+           species_id=species['SpeciesId'],
+           population_id=population['Id'])}}">
+    genotype
+  </a>
 </li>
-{%block lvl4_breadcrumbs%}{%endblock%}
+{%endblock%}
+
+
+{%block sidebarcontents%}
+{{display_sui_population_card(species, population)}}
 {%endblock%}
diff --git a/uploader/templates/genotypes/list-genotypes.html b/uploader/templates/genotypes/list-genotypes.html
index 0f074fd..a2b98c8 100644
--- a/uploader/templates/genotypes/list-genotypes.html
+++ b/uploader/templates/genotypes/list-genotypes.html
@@ -1,23 +1,10 @@
 {%extends "genotypes/base.html"%}
 {%from "flash_messages.html" import flash_all_messages%}
-{%from "populations/macro-display-population-card.html" import display_population_card%}
 
 {%block title%}Genotypes{%endblock%}
 
 {%block pagetitle%}Genotypes{%endblock%}
 
-{%block lvl4_breadcrumbs%}
-<li {%if activelink=="list-genotypes"%}
-    class="breadcrumb-item active"
-    {%else%}
-    class="breadcrumb-item"
-    {%endif%}>
-  <a href="{{url_for('species.populations.genotypes.list_genotypes',
-           species_id=species.SpeciesId,
-           population_id=population.Id)}}">List genotypes</a>
-</li>
-{%endblock%}
-
 {%block contents%}
 {{flash_all_messages()}}
 
@@ -143,7 +130,3 @@
     all the rest.</p>
 </div>
 {%endblock%}
-
-{%block sidebarcontents%}
-{{display_population_card(species, population)}}
-{%endblock%}
diff --git a/uploader/templates/genotypes/list-markers.html b/uploader/templates/genotypes/list-markers.html
index a705ae3..5f3dd6f 100644
--- a/uploader/templates/genotypes/list-markers.html
+++ b/uploader/templates/genotypes/list-markers.html
@@ -1,20 +1,18 @@
 {%extends "genotypes/base.html"%}
 {%from "flash_messages.html" import flash_all_messages%}
-{%from "species/macro-display-species-card.html" import display_species_card%}
 
 {%block title%}Genotypes: List Markers{%endblock%}
 
 {%block pagetitle%}Genotypes: List Markers{%endblock%}
 
-{%block lvl4_breadcrumbs%}
-<li {%if activelink=="list-markers"%}
-    class="breadcrumb-item active"
-    {%else%}
-    class="breadcrumb-item"
-    {%endif%}>
+{%block breadcrumbs%}
+{{super()}}
+<li class="breadcrumb-item">
   <a href="{{url_for('species.populations.genotypes.list_markers',
-           species_id=species.SpeciesId,
-           population_id=population.Id)}}">List markers</a>
+           species_id=species['SpeciesId'],
+           population_id=population['Id'])}}">
+    markers
+  </a>
 </li>
 {%endblock%}
 
@@ -99,7 +97,3 @@
 </div>
 {%endif%}
 {%endblock%}
-
-{%block sidebarcontents%}
-{{display_species_card(species)}}
-{%endblock%}
diff --git a/uploader/templates/genotypes/view-dataset.html b/uploader/templates/genotypes/view-dataset.html
index e7ceb36..1c4eccf 100644
--- a/uploader/templates/genotypes/view-dataset.html
+++ b/uploader/templates/genotypes/view-dataset.html
@@ -1,21 +1,17 @@
 {%extends "genotypes/base.html"%}
 {%from "flash_messages.html" import flash_all_messages%}
-{%from "populations/macro-display-population-card.html" import display_population_card%}
 
 {%block title%}Genotypes: View Dataset{%endblock%}
 
 {%block pagetitle%}Genotypes: View Dataset{%endblock%}
 
-{%block lvl4_breadcrumbs%}
-<li {%if activelink=="view-dataset"%}
-    class="breadcrumb-item active"
-    {%else%}
-    class="breadcrumb-item"
-    {%endif%}>
+{%block breadcrumbs%}
+{{super()}}
+<li class="breadcrumb-item">
   <a href="{{url_for('species.populations.genotypes.view_dataset',
            species_id=species.SpeciesId,
            population_id=population.Id,
-           dataset_id=dataset.Id)}}">view dataset</a>
+           dataset_id=dataset.Id)}}">dataset</a>
 </li>
 {%endblock%}
 
@@ -55,7 +51,3 @@
 </div>
 
 {%endblock%}
-
-{%block sidebarcontents%}
-{{display_population_card(species, population)}}
-{%endblock%}
-- 
cgit 1.4.1