From 1d81a238403c29bb46fb2352505b05cf3c150787 Mon Sep 17 00:00:00 2001
From: Munyoki Kilyungi
Date: Wed, 26 Jul 2023 13:43:33 +0300
Subject: Replace "gn-term" with "gnt" prefix

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
---
 examples/dump-publication.scm | 34 +++++++++++++++++-----------------
 1 file changed, 17 insertions(+), 17 deletions(-)

(limited to 'examples/dump-publication.scm')

diff --git a/examples/dump-publication.scm b/examples/dump-publication.scm
index f79696e..1384261 100755
--- a/examples/dump-publication.scm
+++ b/examples/dump-publication.scm
@@ -21,15 +21,15 @@
 (define-dump dump-publication
   (tables (Publication))
   (schema-triples
-   (gn-term:pubMedId rdfs:range rdfs:Literal)
-   (gn-term:title rdfs:range rdfs:Literal)
-   (gn-term:journal rdfs:range rdfs:Literal)
-   (gn-term:volume rdfs:range rdfs:Literal)
-   (gn-term:pages rdfs:range rdfs:Literal)
-   (gn-term:month rdfs:range rdfs:Literal)
-   (gn-term:year rdfs:range rdfs:Literal)
-   (gn-term:author rdfs:range rdfs:Literal)
-   (gn-term:abstract rdfs:range rdfs:Literal))
+   (gnt:pubMedId rdfs:range rdfs:Literal)
+   (gnt:title rdfs:range rdfs:Literal)
+   (gnt:journal rdfs:range rdfs:Literal)
+   (gnt:volume rdfs:range rdfs:Literal)
+   (gnt:pages rdfs:range rdfs:Literal)
+   (gnt:month rdfs:range rdfs:Literal)
+   (gnt:year rdfs:range rdfs:Literal)
+   (gnt:author rdfs:range rdfs:Literal)
+   (gnt:abstract rdfs:range rdfs:Literal))
   (triples
       (let ((pmid (field
                    ("IF(Publication.PubMed_ID IS NULL, '', CONVERT(Publication.PubMed_Id, INT))"
@@ -40,19 +40,19 @@
                                 (number->string publication-id))
             (ontology 'pubmed: pmid)))
     (set rdf:type 'gn:publication)
-    (set gn-term:pubMedId
+    (set gnt:pubMedId
          (ontology 'pubmed: (field ("IFNULL(PubMed_ID, '')" pubmedId))))
-    (set gn-term:title (delete-substrings (field Publication Title)
+    (set gnt:title (delete-substrings (field Publication Title)
                                           "Unknown"))
-    (set gn-term:journal (delete-substrings (field Publication Journal)
+    (set gnt:journal (delete-substrings (field Publication Journal)
                                             "Unknown"))
-    (set gn-term:volume (delete-substrings (field Publication Volume)
+    (set gnt:volume (delete-substrings (field Publication Volume)
                                            "Unknown"))
-    (set gn-term:pages (delete-substrings (field Publication Pages)
+    (set gnt:pages (delete-substrings (field Publication Pages)
                                           "Unknown"))
-    (set gn-term:month (delete-substrings (field Publication Month)
+    (set gnt:month (delete-substrings (field Publication Month)
                                           "Unknown"))
-    (set gn-term:year (field Publication Year))
+    (set gnt:year (field Publication Year))
     (multiset gn:author
               ;; The authors field is a comma
               ;; separated list. Split it.
@@ -68,7 +68,7 @@
  (connection %connection-settings)
  (table-metadata? #f)
  (prefixes
-  '(("gn-term:" "<http://genenetwork.org/terms/>")
+  '(("gnt:" "<http://genenetwork.org/terms/>")
     ("gn:" "<http://genenetwork.org/id/>")
     ("pubmed:" "<http://rdf.ncbi.nlm.nih.gov/pubmed/>")
     ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
-- 
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