From 2363e578a834d4017ef4e320fa7da553376c61cf Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Mon, 22 May 2023 10:51:20 +0300 Subject: Update a dataset's subject identifier to be a gn url Signed-off-by: Munyoki Kilyungi --- examples/dump-dataset-metadata.scm | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) (limited to 'examples/dump-dataset-metadata.scm') diff --git a/examples/dump-dataset-metadata.scm b/examples/dump-dataset-metadata.scm index aa7a5f2..e4f8334 100755 --- a/examples/dump-dataset-metadata.scm +++ b/examples/dump-dataset-metadata.scm @@ -130,8 +130,10 @@ (gn:contributors rdfs:range rdfs:Literal) (gn:citation rdfs:range rdfs:Literal) (gn:acknowledgment rdfs:range rdfs:Literal)) - (triples (string->identifier "dataset" - (field InfoFiles InfoPageName)) + (triples (ontology 'dataset: + (regexp-substitute/global #f "[^A-Za-z0-9:]" + (field InfoFiles InfoPageName) + 'pre "_" 'post)) ;; Add GeneChipName and GeoPlatform: ;; GeneChip.GeneChipName AS gene_chip_name ;; GeneChip.GeoPlatform AS geo_platform @@ -214,6 +216,7 @@ (prefix "uniprot:" "") (prefix "up:" "") (prefix "xsd:" "") + (prefix "dataset:" "") (newline) (dump-info-files db) (dump-investigators db)) -- cgit v1.2.3