From f1a55971870a88c695a822549d702852e6fde123 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Wed, 10 Jul 2024 11:48:24 +0300 Subject: Remove the "generif-data-file" from the documentation. Right now, we get the generif metadata from the GeneRIF_BASIC table. Signed-off-by: Munyoki Kilyungi --- README.md | 10 ++-------- 1 file changed, 2 insertions(+), 8 deletions(-) diff --git a/README.md b/README.md index 06dc82d..72ca166 100644 --- a/README.md +++ b/README.md @@ -44,8 +44,7 @@ shown below. Take care to replace the placeholders within angle brackets with the appropriate values. ``` scheme -((generif-data-file . "/path/to/generifs_basic.gz") - (sql-username . "") +((sql-username . "") (sql-password . "") (sql-database . "") (sql-host . "") @@ -58,14 +57,9 @@ with the appropriate values. (sparql-port . )) ``` -Download the GeneRIF data file from -https://ftp.ncbi.nih.gov/gene/GeneRIF/generifs_basic.gz and specify -its path in the `generif-data-file` parameter. - Here's a sample *conn.scm*. ``` scheme -((generif-data-file . "/home/gn/generifs_basic.gz") - (sql-username . "webqtlout") +((sql-username . "webqtlout") (sql-password . "my-secret-password") (sql-database . "db_webqtl") (sql-host . "localhost") -- cgit v1.2.3