From dff2861c54ee096196d2f843f306068f6a1a81dd Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Thu, 27 Apr 2023 10:58:45 +0300 Subject: Update how Species are dumped * dump.scm (dump-species): Rename gn:menuName to gn:displayName. Add gn:family and up:organism triplets. Signed-off-by: Munyoki Kilyungi --- dump.scm | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/dump.scm b/dump.scm index ef578e8..c0440f5 100755 --- a/dump.scm +++ b/dump.scm @@ -383,13 +383,16 @@ must be remedied." (tables (Species)) (schema-triples (gn:name rdfs:range rdfs:Literal) - (gn:menuname rdfs:range rdfs:Literal) - (gn:binomialName rdfs:range rdfs:Literal)) + (gn:displayName rdfs:range rdfs:Literal) + (gn:binomialName rdfs:range rdfs:Literal) + (gn:family rdfs:range rdfs:Literal)) (triples (binomial-name->species-id (field Species FullName)) (set rdf:type 'gn:species) (set gn:name (field Species SpeciesName)) - (set gn:menuName (field Species MenuName)) - (set gn:binomialName (field Species FullName)))) + (set gn:displayName (field Species MenuName)) + (set gn:binomialName (field Species FullName)) + (set gn:family (field Species Family)) + (set up:organism (ontology 'taxon: (field Species TaxonomyId))))) (define-dump dump-strain (tables (Strain -- cgit v1.2.3