From 98b8397f788ac109a4c45bcfd5ecdef25dbd2b98 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Tue, 19 Dec 2023 20:31:46 +0300 Subject: Delete "GROUP BY" when transforming genelist/genelist_rn33 metadata. Signed-off-by: Munyoki Kilyungi --- examples/genelist.scm | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/examples/genelist.scm b/examples/genelist.scm index 2d94a3b..d6337bf 100755 --- a/examples/genelist.scm +++ b/examples/genelist.scm @@ -15,8 +15,7 @@ (define-transformer genelist (tables (GeneList - (left-join Species "USING (SpeciesId)")) - "GROUP BY BINARY GeneSymbol, GeneId, chromosome, txStart, txEnd") + (left-join Species "USING (SpeciesId)"))) (schema-triples (gnt:gene rdfs:domain gnc:GeneSymbol) (gnt:belongsToSpecies rdfs:domain gnc:GeneSymbol) @@ -303,8 +302,7 @@ #\,))))) (define-transformer genelist-rn33 - (tables (GeneList_rn33) - "GROUP BY BINARY GeneSymbol, chromosome, txStart, txEnd") + (tables (GeneList_rn33)) (triples (string->identifier "gene" (regexp-substitute/global #f "[^A-Za-z0-9:]" -- cgit v1.2.3