From ea8341ec32a09f9dd6ff62c4f916c119921acefb Mon Sep 17 00:00:00 2001
From: Efraim Flashner
Date: Sun, 22 Jan 2023 10:10:58 +0200
Subject: update pubmed update script

---
 update_archive-pubmed.sh | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/update_archive-pubmed.sh b/update_archive-pubmed.sh
index b8bc87d..c242953 100755
--- a/update_archive-pubmed.sh
+++ b/update_archive-pubmed.sh
@@ -1,2 +1,6 @@
 #!/bin/sh
-/bin/su -l hchen -c 'export EDIRECT_PUBMED_MASTER=/export2/PubMed; export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt; export NLTK_DATA=/export2/PubMed/nltk_data; unset PATH; $(/home/shepherd/guix-profiles/genecup/bin/guix build edirect)/bin/archive-pubmed'
+export EDIRECT_PUBMED_MASTER=/export2/PubMed
+export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt
+export NLTK_DATA=/export2/PubMed/nltk_data
+unset PATH
+$(/home/shepherd/guix-profiles/genecup/bin/guix build edirect)/bin/archive-pubmed
-- 
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