aboutsummaryrefslogtreecommitdiff
path: root/genenetwork
AgeCommit message (Expand)Author
2024-11-08DO NOT MERGE: Revert commit 4ddf33dFrederick Muriuki Muriithi
2024-11-07Run script to make non-human data publicFrederick Muriuki Muriithi
2024-11-07Pass log-level to gn-auth applicationFrederick Muriuki Muriithi
2024-11-07Define REQUESTS_CA_BUNDLE envvar for python-requestsFrederick Muriuki Muriithi
2024-10-29Do not share auth-db with genenetwork3 gunicorn app.Frederick Muriuki Muriithi
2024-10-29Add llm-db-path field to genenetwork configuration..Frederick Muriuki Muriithi
2024-10-29Remove obsolete SSL key configuration.Frederick Muriuki Muriithi
2024-10-29Enable AI search in genenetwork service.Frederick Muriuki Muriithi
2024-10-24Add GN3 alias server to genenetwork service.Frederick Muriuki Muriithi
2024-10-24Add sanitizer for log-level configuration field.Arun Isaac
2024-10-24Make <gn-uploader-configuration> log-level a symbol.Arun Isaac
2024-10-24Re-format and improve indentation.Arun Isaac
2024-10-24Regularize <gn-uploader-configuration> getter functions.Arun Isaac
2024-10-24Add log-level field to genenetwork-configuration.Frederick Muriuki Muriithi
2024-10-24Set REAPER_COMMAND in gn3.conf.Frederick Muriuki Muriithi
2024-10-24Set GENOTYPE_FILES in gn3.conf.Frederick Muriuki Muriithi
2024-10-02Update server root for gn-uploader.Frederick Muriuki Muriithi
2024-08-13Forward the scheme to the client to generate correct URIs.Frederick Muriuki Muriithi
2024-08-13gn-uploader: Configure link to GN2 server.Frederick Muriuki Muriithi
2024-08-07gn-uploader: Add `AUTH_SERVER_URL` to the configurations.Frederick Muriuki Muriithi
2024-08-07gn-uploader: Update ENVVAR nameFrederick Muriuki Muriithi
2024-08-07gn-uploader: Update configuration variable name.Frederick Muriuki Muriithi
2024-07-22gn-uploader: use `gn-uploader-configuration` as default.Frederick Muriuki Muriithi
2024-07-22gn-uploader: make app user owner of upload directory treeFrederick Muriuki Muriithi
2024-07-12Extend the genenetwork-service-type with the mcron indexer serviceFrederick Muriuki Muriithi
2024-07-12Generalise index-genenetwork cron gexpFrederick Muriuki Muriithi
2024-06-28Make secrets dirs writable by relevant services.Frederick Muriuki Muriithi
2024-06-28Remove duplicated, and wrong settings.Frederick Muriuki Muriithi
2024-06-28Fix permissions: Only files are read-onlyFrederick Muriuki Muriithi
2024-06-28Make relevant services available to each service.Frederick Muriuki Muriithi
2024-06-28Set secrets as directories for services with multiple secrets.Frederick Muriuki Muriithi
2024-06-28Add JWT SSL keys configurations.Frederick Muriuki Muriithi
2024-06-12gn-uploader: Setup profile pathFrederick Muriuki Muriithi
2024-05-07gn-uploader: Serve static files via nginx.Frederick Muriuki Muriithi
2024-04-12gn-uploader: use installed entry-point.Frederick Muriuki Muriithi
2024-04-12gn-uploader: use defined app in wsgi.py to pick up logging configs.Frederick Muriuki Muriithi
2024-04-12Set up log level in gunicornadd-gunicorn-loggingFrederick Muriuki Muriithi
2024-04-10gn-uploader: Enable changing of log-level for container.Frederick Muriuki Muriithi
2024-04-09gn-uploader: Change ownership of data-directoryFrederick Muriuki Muriithi
2024-04-09gn-uploader: Made datadir writable and set up uploads directory.Frederick Muriuki Muriithi
2024-04-05Document configuration settingsPjotr Prins
2024-04-03Set up SQL_URI for gn-auth.Frederick Muriuki Muriithi
2024-04-03gendev: special machine for PjotrPjotr Prins
2024-04-01Share TMPDIR between GN2 and GN3Pjotr Prins
2024-04-01fallback: have gn2 and gn3 share a source directory so we can update/debug so...Pjotr Prins
2024-03-28gn-uploader: Increment maximum size of uploadable files.Frederick Muriuki Muriithi
2024-03-25Add gn-uploader service.Frederick Muriuki Muriithi
2024-03-21Add timeout for proxiesPjotr Prins
2024-03-05Let the gunicorn-gn-auth user own the auth database.Arun Isaac
2024-03-05Pass on the request scheme to GN2 appFrederick Muriuki Muriithi